XLOC_020224 (pxk)


Basic Information

Item Value
gene id XLOC_020224
gene name pxk
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 10166407 ~ 10199014 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040210
ATGGCGTTCATGGAGCAGCAGCCGCAGCCGTTGTCCGGGAGGAAGCCGCCGCTGGACGACACCGTGCCGTTGAGCGCCGTGATCGAAGCCAGCCAGAGTTTACAGTCGCACACGGAGTACATCATTCGAGTCCAAAGGGGCGTTTCCACAGACAATAGCTGGACGGTCATCCGCAGATACAGTGACTTCGACATGCTGAATAACAGTTTACTGATATCAGGTCTAAACCTGCCACTTCCTCCAAAGAAGCTGTTAGGAAACATGGACCGTGAGTTTATAGCCGAGCGACAGAAGGGTCTTCAGGCCTACCTGAACTACATCACACAACATCACATCCTGTGCAGCTGTGAGCTGGTCAAAAAGTTTCTCGACACTAATAATTATTCAGCAAACTACACAGAAATAGCTTTACAGCAGGTGTCCATGTTCTTCAGATCTGATCCAAAATGGGAAGTTATTGAGCCGTTAAAAGACATTGGCTGGCGTTTGCGAAAGAGGTACTTTTTAGTCAAAGACAAAGATCAGCCCAAAGAAAAACAAGTATTAAGTTGGGTTGATTTGGGTCCAGATAAATTCCTGTCCGACAAAGATCTCCAGTCTGCAATGAAGCTGCTGCCAACTTTGTCTCATTCAAACATCTCTCCTGTCAGTTTCGCCACTACCAGTGAATCCTCTGCACTTATTATCCGGGTTTTCAGCGAGAAAGGAACACTAAGGGATCACATTTGCAAGGTGAAGCCCAAAGAGCCCTTTCTGAGGAAGTACTGCAATCCCAAGAAGATCCAGGGTTTGGAGCTGCAGCAGATCCGCACGTTTGGGAGACAGATTCTGGAGGCATTAAAATTTCTCCACGACAAAGGTTTTCCATATGGGCATCTTCACGCGTCCAATGTCCTGATCGAGGAAAACACGTGTAAACTGCTGGATGTAGAGAACTCATTACTGGGACTGCCGTCATACTACAGGCCTTATGTGACGCAGTTCAGGAAAATTAATACCACAGAAAGTATAGACGTTTACTCGTTTGGACACTTGCTGTATGAAATGACGTATGGCCGTCCGCCTGATGCTGTTCCTGTAGATCAGTGTCCTCCAGCTCCATTCTCATCCATCGTCTCTGTTCTTCAGTCCATTCTGTCCACTGAAGCTTGCAAAACAGGAATGCCAACCGTTTCCCAACTGCTGCAAACACCGTTATTCTATGACGTTCTGCTGTTCAACTCTGAAAAACCCCAGTTTAAGATCAGCTCTAAATTAAAGGAGGCTCTGAAATCCTCCAAAGAGGGTTTGGAGAAGCGTCTGGTGGAGGAGCAGAGGACGatccaCCAGCATAAGCGACTGACCCGAGCGCAGTCACACCATGGctcagaggaagaaaagaggaagaggaagatcTTGGCCAGAAAGAAATCAAGACAGTCAACTTATGAAATTGAGGAGGATCTCTCTGTCAAATATAACAATAACTCTGCAGGTTCTGGAGCGAGTTCACCTCCAACCTGCCCGTCCTCTCCTACTCCTCTACCTGGATCAGgagctcctcttcctcctcctcctcctccccctccTCCGCCTCCACCACCCGGGATCGACTCCGGCCCTCCGTCTCTCTCTCCTCCCAGTGCCAACGGTGTGGGCAGAGGTGCCCTCCTCAGCTCCATACAGTCCTTCagcaaaaacaaactgaaaaaagcaGAGACTGTTGACCGCAGCGGCCCACGTTTGTGAagaaaaaacaacatcaacaacgcTTGTCTTGTTTTAGTGCAATTCGTCCACTCAAAGTCTTTTAGCAACTTGCGTCTAGCAGTGAAAAGTGACTGTTTGTAATCGAACTTTGTTGCCATTCAATTCCAGCAGAGCCCTGCGTttattcagggtttttttttgtttgtcaagcTACCCGAAGTAACCTAAGCAGTTCTGCTTGGACCagctgttttattaaaaaacgGACAAATGCACTCATTCGGATGAAAAATACGAcctctacattttaaaagtactGACTTACGAAGGCAGAAATTGGTGGAGAATGCAGGCAACACCTTTATTTTTTGACGATAATTAACGTTACGTACACGATTCTGCTTTGACCAGCTGTCGCATTAAAATTCAGCACCTGCGCACTcatttgaacagaaaaaaaatagcatttcatTTTTGATTATTGTTTTACGAAGGCAAAACATGAAGGAGAATGCGGACAACATGTTTACGTTTTTGACGATAATAAGTGCAACCTAAATGATTCTGCTTAGACCTGCTATCGCATCTAAATTAAGAACTTGCGCACTCATTTAACCAAAAAAACTACCATCTTCAATTTCAATTATTGTTTTTACGACAGCAGAACATGGAGGAGAATGCAGACAACATGTTTCCGTTTTAGACGATAATTAACATAACGTTTTGTCTTACCAAGGcagaatatgaaaaaaaatgtggGCAACACCTTTATTTTTTGACGATAATTAACGTAACCTAAATGATTCCACCTGGACCAGCTGTCACATCTAAATTAAGGACTTGCGCACTCATTTGACTGAAAAAAAATACCATTTTCAATTTTGCTTATTGTTTTACGAAGGCAAAACATGAAAAAGAATGCGGACAACACATTTATGTTTTTGACAATAATTAGCATAACCAAATGATTCTGCGTGAACCAGCTGTCGCATTTAAATGAGAAATTTGAAGTCAATTTAAAGTATTGTCGAACAAACGTAAAGGATGGAGTAAAACGGGggcaatacatttattttttgacgttaacCTAACGTTAACAATTCTGCTTGAACCAGCTGTCACATCTTAATTAAAGACTTGCGCACTGATTTGACCGAAAAAATACCATTTTCAATTTCAATTATTGTTTTACGAAGGCAGAACATGGAGAAGAATGCAGGCAACACTTACATTTTTTGTCGATAATTAAGATAACCCAAGCGATTCTGCTTGGACCAGCTGTCGCATCTAAATTAAGGACTTGCGCACTCATTTACCCGAAAAAATAGCATTTTCAATTATCGTTCTATGAAGGCAAAACATGGAGAATAATGCAGGCAACATGGTTACGTTTTTGATTATAATTAGCGTTACCTAAACAATTCTACTCGCACCAGCTGTCACTTCTAAATTAAAGACTTGCACACTCATACCGAAAAACATACCATATTTTCAAATCAATTATTGTTTTACGAAGGGAGAACATGGAAGAGATTGCAGGCAACATTTACGTTTTTGACGATAATTAGCGTAACCTAAACAATTCTGCTTGGACCAGCTGTCGCATCTAAATTAAGGACATGCACActcattttaacaaaaaaaaaaaattaagtcaatttaaatttaaagtattttcTAACGAAGGCAGAAGATGGAGGAAAAAGCGGTCAACACATTTATATACTTCTATTCATTTAGTACGAATGAGAACGTATAACCAGATTTTGTTGTCGGTTCATAAAATGAGCGACATTTAAATCTGACATTTTAATTCAACTGTTTGTTTTGGAGGGTTCAAGTTGCTTTTGCCACATTTACCATTGTGCCTACAAAAGCTAAGAGCTTTTTATTGTTTCGTTTTTTTTGTTCAAGCTACATTTGTACGTATTTTCTTTCGGAACAAAGTACTCTTTGTATTCCTGTTCTGAAAGATCACAATCAAACATGTTGCACAAATATTGACATTAAGAAAATGCGTTTACGCTTCTTAAAAGAACAGTTCACCCCTAAATACTAAATTCGGTCACTACTTTTTCTCCGCTTCAAACCTGTTTGTTTCCGTTTTCcgtctaacaaaaaaaaaagagatattttgaagaatgttggaaactagtagccagtgacttccatagtatttattattctactatggaagtcaatggcttccCGTTTCCAGTATATATGTTGaaatagtatatttatagtggaAACGTTTTTATTtaggggtgaactgtctctttaaaaaaagCTGCTGTTAGAAAGAAAAATGGCTTTGATTTACCACTGAAATGATTGTATATTGTCCATTGTGGTGTCACTTATTCCGTCTAATCCCATTGGTTGCTGCAGCCTGGTAGGgattttcagccaatcagagatgACCAAGTGTTGGTAAACGAAAGCGGTTTCTcattttgcacacacacatattgggGAGACTTGTATATTTCATATTCATCGCGGGGTCCTGTTGAAAAGCAGATCCAATTGTAATCTATACCAGTGTACAGTAATGCACAAAGCTCTAGTACCCGCATTTGTACATAGACTCAGACACACACTGAAAGCAGTTCAGTAGCGTACTACACATTCTCAGCTTTGTTATTACCGTGGGGGAAgagtttaataatgttttcattttttcgcTACAGCACTTTACCGCTGATTATTTGGCAGTGGTCTTGAAGAAGAAACATTCTAAAGTTTACAACAGAGATTTATGTATGTATGAGGACGGTTGAAGAATTAAtgtgtttgatgatgatgatgatgatgatgaaatttGCCACTGATTTTCGCCTCTGTACAGTTGCCACATCCGTCTTTGAAAGCACTGGAGGAGAACGTCCTCAAAGTGCTAAAATATTGTTTTCCCTGTTATTAAAAATACTTGTATTggcaatatattttaaaaggatGGTCTTGTGCTTTTAGTTGTGAACATTGAAGTAAAGACAATGGAACAGA

Function

symbol description
pxk Predicted to enable several functions, including ATP binding activity; actin binding activity; and phosphatidylinositol binding activity. Predicted to be involved in negative regulation of ATPase activity; negative regulation of ion transport; and regulation of membrane potential. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human PXK (PX domain containing serine/threonine kinase like).

GO:

id name namespace
GO:0042391 regulation of membrane potential biological_process
GO:0043271 negative regulation of ion transport biological_process
GO:0006468 protein phosphorylation biological_process
GO:0032780 negative regulation of ATPase activity biological_process
GO:0005886 plasma membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0035091 phosphatidylinositol binding molecular_function
GO:0003779 actin binding molecular_function
GO:0004672 protein kinase activity molecular_function

KEGG:

id description
ko01001 Protein kinases

ZFIN:

id description
ZDB-GENE-050208-393 Predicted to enable several functions, including ATP binding activity; actin binding activity; and phosphatidylinositol binding activity. Predicted to be involved in negative regulation of ATPase activity; negative regulation of ion transport; and regulation of membrane potential. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and plasma membrane. Orthologous to human PXK (PX domain containing serine/threonine kinase like).

Ensembl:

ensembl_id ENSDARG00000063195

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040210 True 4698 mRNA 0.40 18 10166407 10199014

Neighbor

gene id symbol gene type direction distance location
XLOC_020223 NA coding upstream 1542 10158463 ~ 10164865 (+)
XLOC_020222 tbc1d20 coding upstream 24938 10129788 ~ 10141469 (+)
XLOC_020221 NA coding upstream 69180 10073420 ~ 10097227 (+)
XLOC_020220 si:ch211-222k6.3 coding upstream 95111 10066846 ~ 10071296 (+)
XLOC_020219 NA coding upstream 117174 10018900 ~ 10049233 (+)
XLOC_020225 pdhb coding downstream 2812 10201826 ~ 10212502 (+)
XLOC_020226 NA coding downstream 15980 10214994 ~ 10222660 (+)
XLOC_020227 si:dkeyp-87e7.4 coding downstream 33513 10232527 ~ 10262441 (+)
XLOC_020228 NA coding downstream 101389 10300403 ~ 10354336 (+)
XLOC_020229 cenpp coding downstream 241977 10440991 ~ 10514343 (+)
XLOC_020216 NA non-coding upstream 174913 9989905 ~ 9991494 (+)
XLOC_020212 NA non-coding upstream 261784 9897971 ~ 9904623 (+)
XLOC_020240 BX666064.1 non-coding downstream 883762 11082776 ~ 11085979 (+)
XLOC_020241 NA non-coding downstream 891614 11090628 ~ 11098487 (+)
XLOC_020242 NA non-coding downstream 903977 11102991 ~ 11104983 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000030_08123594_08127280 PXK coding CI01000030 null 8123192 ~ 8127487 (-)