G70438


Basic Information

Item Value
gene id G70438
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 63685353 ~ 63685565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU77961
atcttcacgtAATCACTAGATAACCAAACATGGTTGATggtattactaggttaactagcttgtcctgcgttgcatatagtTCATGCGGCGCCTGTTAATTTATCACCgcatcacagcctacttcaactttgccaaacaggtgatgatttaacaaaagcgcattcgcaaaaaaaaagcacattcgctgcacaaatgtacctaaccataaataaC

Function

NR:

description
PREDICTED: TBC1 domain family member 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77961 True 213 lncRNA 0.39 1 63685353 63685565

Neighbor

gene id symbol gene type direction distance location
LOC110526795 NA coding upstream 63924 63620237 ~ 63621429 (+)
LOC110526778 LOC106576786 coding upstream 86547 63565503 ~ 63598806 (+)
LOC110526770 LOC106576788 coding upstream 185903 63323902 ~ 63499450 (+)
LOC110526727 LOC106576790 coding upstream 395452 63283327 ~ 63292127 (+)
LOC118965245 LOC106576791 coding upstream 439908 63239050 ~ 63245445 (+)
LOC118965254 NA coding downstream 295568 63980371 ~ 63998531 (+)
LOC110526877 LOC106576777 coding downstream 782958 64468523 ~ 64471084 (+)
LOC110526912 LOC106576775 coding downstream 1088350 64773915 ~ 64783737 (+)
LOC110526969 stk32c coding downstream 1123690 64809255 ~ 64946164 (+)
LOC110526991 LOC106576769 coding downstream 1286829 64972394 ~ 64984304 (+)
G70434 LOC106576784 non-coding upstream 6353 63676126 ~ 63679000 (+)
G70399 NA non-coding upstream 56758 63628268 ~ 63628595 (+)
G70300 NA non-coding upstream 129504 63555609 ~ 63555849 (+)
G70284 NA non-coding upstream 156287 63524086 ~ 63529066 (+)
G70282 NA non-coding upstream 164394 63520565 ~ 63520959 (+)
G70462 NA non-coding downstream 43334 63728899 ~ 63733431 (+)
G70465 NA non-coding downstream 48400 63733965 ~ 63734188 (+)
G70467 NA non-coding downstream 53021 63738586 ~ 63738796 (+)
G70522 NA non-coding downstream 135555 63821120 ~ 63821353 (+)
G70524 NA non-coding downstream 140063 63825628 ~ 63825898 (+)
G70011 NA other upstream 410057 63274963 ~ 63275296 (+)
G67930 mcmbp other upstream 1951965 61729765 ~ 61733388 (+)
G67806 LOC106581772 other upstream 2370101 61314874 ~ 61315252 (+)
G66188 NA other upstream 3743289 59941486 ~ 59942064 (+)
G65442 NA other upstream 4360224 59324636 ~ 59325129 (+)
LOC110527164 LOC106576754 other downstream 2230170 65915581 ~ 65922285 (+)
G73515 NA other downstream 2602114 66287679 ~ 66288469 (+)
LOC118965274 LOC106576739 other downstream 2734930 66417495 ~ 66424081 (+)
G74067 LOC106576735 other downstream 3070642 66756207 ~ 66758984 (+)

Expression


Co-expression Network