G99954


Basic Information

Item Value
gene id G99954
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 90101063 ~ 90151194 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU110951
TTATTAGACTGACAAGTGGggcaccaacaacaacaaaaaacgaatTCCTGACACAAAATAAGCAATATAGGTGGATGGAATTTCAGTTTTTAGAATGATCAAAATctctatttttttttctctctcgaaatcaccaaaaaatacacaaaaataaATatcGAACCGAGAAATATGCTCCGTTAAGAAACCTTTAagagaaaaataataatttctctCAGTAGTGGAATCACCCTCTAAAAGAGAGGCTTGCATCCCAAGTGGCTCCCTAATCCCTGCATAGTGCACGACTTCAGACCAGAGCTTTATGGGCCCTGATTAAAAAGCtgtacactataaagggaagagTGTTCCATTTGGGATATAGAGTAGTCTAGTCTCGTTGTCCTGCTTCATAGATCATAGCTACAGGATTTATATACGCAGCAACTCTGATTTTGACAACACAACCAGGTAAATAGTGAACCCTTTCCCACCGTCTCAGGTCTCAATCCGTTCCATTTTTAGCAGATCTGCGATTTCAATATTCAAGCAATTGTTCACAATGGAACATAAATGTATGATACTAGATGCATTTCTGACAGTAACATTTTGATGGCCAGATTATCAGATGATAGTTCTCTATGGTGAAACAGAACGCTCTCTTGCTTACAAAACAGAAAAGAATGAAGCAATAATTCACATATTTAAGACAAAAACTAGCAATCTCAccactgtacccccccccccccccccccacctcccactCCCCAGATCCACACGGCAACAATAGAGACAGAATTCCATGCCCCGAAATCCCCAAATCTTTTGCTGTTAGGAGACAAAGATGCTTGCATCCcaagtgacaccctattccctatatagtgcactacttttgacagacCCCCTATGGGTGTCCCTATgagacctggtcaaaagtagtgcactacatagggaatagggtgccatttgggacgcaagcctCAGCCATCATCCCTGTAGTTGTAGGCCAGTGGATCCATCCTGACCAGGTTCTCCGTTTGGGTTCAGTTTCTACCAGATGTATCCTCCGTCGtctgcctccccctcttcctcttcctcctcctcctccgcctcttctccgttctcctccttctcttcctcatcctcccatCCCACGCCACTCCCAAAATCTCCGGAATATCCCAGCAGTTCATCTGGAGCGAGGGATGAAATGAAAAGAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110951 True 1200 lncRNA 0.44 2 90101063 90151194

Neighbor

gene id symbol gene type direction distance location
LOC110519290 cj104 coding downstream 180605 89912298 ~ 89920458 (-)
LOC118966075 LOC106577395 coding downstream 198545 89900338 ~ 89902518 (-)
fbxl15 fbx37 coding downstream 297270 89797912 ~ 89803793 (-)
ghitm LOC100136239 coding downstream 830692 89223150 ~ 89270371 (-)
LOC118966065 NA coding downstream 1318944 88757265 ~ 88782119 (-)
LOC110515024 LOC106613759 coding upstream 236 90151430 ~ 90156318 (-)
LOC110532927 LOC106577426 coding upstream 331527 90482721 ~ 90498148 (-)
LOC110531748 polr3a coding upstream 397046 90548240 ~ 90602774 (-)
LOC118966735 LOC106564289 coding upstream 494784 90645978 ~ 90657019 (-)
LOC118966736 LOC106585883 coding upstream 542385 90693579 ~ 90695233 (-)
G99987 NA non-coding downstream 5161 90095201 ~ 90095902 (-)
G99978 NA non-coding downstream 18272 90082488 ~ 90082791 (-)
G99960 NA non-coding downstream 59267 90040851 ~ 90041796 (-)
G99604 NA non-coding downstream 129524 89966739 ~ 89971539 (-)
G99601 NA non-coding downstream 138075 89962725 ~ 89962988 (-)
G99957 NA non-coding upstream 25590 90176784 ~ 90177309 (-)
G100023 NA non-coding upstream 46409 90197603 ~ 90199466 (-)
G100024 NA non-coding upstream 46831 90198025 ~ 90199853 (-)
G100051 NA non-coding upstream 104621 90255815 ~ 90256156 (-)
G100076 NA non-coding upstream 157719 90308913 ~ 90310511 (-)
G99602 NA other downstream 136858 89963873 ~ 89964205 (-)
G99595 NA other downstream 143147 89957392 ~ 89957916 (-)
G99035 NA other downstream 811007 89287214 ~ 89290056 (-)
G98878 NA other downstream 1024825 89075847 ~ 89076238 (-)
G100197 NA other upstream 476339 90625080 ~ 90858972 (-)
LOC110516041 jakmip3 other upstream 831541 90982735 ~ 91072716 (-)
G100582 NA other upstream 1081546 91232740 ~ 91233788 (-)
LOC110531398 glrx3 other upstream 1641385 91791792 ~ 91832379 (-)
G102060 NA other upstream 2440387 92591581 ~ 92595514 (-)

Expression


Co-expression Network