LOC110520731 (LOC106605982)


Basic Information

Item Value
gene id LOC110520731
gene name LOC106605982
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 9309984 ~ 9315691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021598151.2
ATGTCTGATAAGGGTCCTGTATTAACGTCAGAAAAAGACGTCCAAAAGGCATCGCCTGATGTCAAATGCTTTGTGGTGTCAGACGCTGCTGGACAAGGTGTGACCATCACTGGAGAGAATACCTACAACAACTGGGACTGGACCAATTCAGTTGTCTTTGCTGCCACTATTGTCACTACCATAGGTTATGGTAATGTTGCCCCAAAGACGGCTGGCGGCCGTATATTCTGCATCCTGTATGGCCTGTGTGGGATCCCTCTCTGCCTCACCTGGATTAGTGAGCTGGGCTCGTTCTTCGGAGACAGAGCCAAGCGCCTGGGACAGGTCCTGGTACTCAAAGGCCTTAGTGTGAAAAAGGTCCAGTTGATCTGCACGGCCATCTTCCTCCTGTGGGGTCTGCTGGTACACCTGGTGATCCCCCCGTTTGTGTTCATGTCCCTGGAGGGATGGTCGTACCTGGAGGGCTTCTACTTCTCCTTCATCACCCTCACCACTGTCGGCTTCGGGGACTACGTCGCAGGTATCAAtccaaacatagactacccaagGCTGTACCGGGTGTTTGCAGAGGTGTGGATCTACATGGGTCTGGCCTGGCTGTCTCTTTTCTTCAGCTGGAACGTCCACATGGTGGTGTCGGCTCACAAGGTCCTgaagaagagaaggcagagacACAGGATGGACCACCTGGACCATCGATGGCAGCTCGAGAAGGACGACATCCGCAGCCCTCGCCGCCTCCCCACCGCCGTCGACATCTTCAACTTCCTGTCTGAGAAGCATGAGGACTACAGCACCGCCATCAGGCAGATTGGCGCTGCCGCGAAGCCGAAGCCGAAGATGGAATTCAAGGAGTTGAGTCGTTCAAAGAGCTGTAGTGACATCCTGGGGACGAATATCCAAACCCTGGAGCATTCCCCACGCCGCCTGAGGCGCCACCTCAGCATCAGTCACAATATGTTACTAAGCAGCtttgggatgggagaggaggggcagaggCTTATCGAGGATGACCCTGTCTTTATGAAAGACCCTGGGTTTGAGGAGAACTGTCTGGATAGGGACACTAGAGTGAAGGCTGTTTATGTGTCCAACTCAAAAGAGAACCTAAACCCTGCCGATCTAGGTCCTAACATCAACAAAGAGGAGAATGTTCAGAATCAAGATGGTGGAGAGAATAGGTTTACTGTATCAAAGGTAGTGGAGGGGGATTCGGGAGAGGAGAATGATGAGAAAGGCTGAAGCCTTGGATCCATCCTCTTCATGGAGAACTGAATGATGTAATCAAAAGGGGACTATCGCTCTCTCCTAGAAGTTTGGTTGGTGCGTAAAACCTGTGAATTCAGATAAATAAAAAGGTATGATGGGTCTGTGATGGGTCCGCGGATCATCAACACTTTTTATTTATCACCCCATCACACCTTTTAATTTATCATCCCCCATCACACCTTTTAATTTATCATCCCCCATCACACCTTTTAATTTATCACCCATCACACCTTTTAATTTATCACCCCATCACACCTTTTCATTTATCACCCCCATCACACCTTTTAATTTATCATCCCTCATCACACCTTTTAATTTATCATCCCTCATCACACCTTTTAATTTATCATCCCCCATCACACCTTTTAATTTATCACCCATCACACCTTTTAATTTATCACCCCATCACACCTTTTTATTTATCATCCCCCATCACACCTTTTAATTTATCACCCCATCACACCTTTTTATTTATCACCCCCCATCACACCTTTTAATTTATCACCCCCATCACACCTTTTAACTTATCATCCCCCATTACACCTTTTAATTTATCACCCATCACACCTTTTAATTTATCACCCCATCACACCTTTTAATTTATCATCCCCCATCACACCTTTTAATTTATCACCCATCACACCTTTTAATTTATCCCCCATCACACCTTTTAATTTATCATCCCCATCACACCTTTTAATTTATCACCCATCACACCTTTTAATTTATCCCCCATCACACCTTTTAATTTATCATCCTCATCACACCTTTTAATTTATCACCCCATCACACCTTTTAATTTATCACCCCATCACACCTTTTAATGTATCACCCCATCACACCTTTTTATTTATCACCCCATCACACCTTTTTATTTATCACCCCATCACACCTTTTTATCCATCTGAACTGAATGATGTAGAAGCATCATAACAAGGTCCTGGGACAACCAGAGACTATGGCAGAGTTAGGATTGGTCACATTCCCCTGTGGTGAGGAGTGGAAACACATTTTCAACGGTTTTCCTTAACATCGTGATCAGTGAAATGTATGACCCAAGATTATCAAGACCTAAGATCATGAACACAGTCTGGACAACTTCCTGTCTTCTCTGTTATCTTTATCTCGATGTTAAACACACATTTTGGTCTGTGGGAAAAGTAAAAGAAGGAAAATATAGCAAACAATGGACTCCTTAGAGCTGCCAGTGTGATTTACCTGACTCTAAAATGAGAAACTGAAAGCAATGTAGTTTGTCTATTGTTACAAACTGCGTTCAGAAATAAAGTTTACATGAGTTTCTA

Function

NR:

description
potassium channel subfamily K member 5-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021598151.2 True 2573 mRNA 0.45 6 9309984 9315691

Neighbor

gene id symbol gene type direction distance location
LOC110535231 LOC106573472 coding upstream 66372 9239896 ~ 9243612 (+)
LOC110535224 aif1 coding upstream 81684 9221418 ~ 9229025 (+)
LOC118937651 LOC106606075 coding upstream 94844 9212074 ~ 9216058 (+)
LOC110535199 LOC106606086 coding upstream 120781 9175670 ~ 9189203 (+)
LOC110534026 LOC106606081 coding upstream 141033 9149173 ~ 9168951 (+)
LOC118944051 LOC106573691 coding downstream 39331 9355022 ~ 9358422 (+)
LOC110519250 mroh1 coding downstream 129499 9445190 ~ 9482500 (+)
LOC110506885 LOC106573706 coding downstream 233011 9548702 ~ 9551644 (+)
LOC110506952 LOC106606100 coding downstream 386299 9701990 ~ 9742723 (+)
LOC110520736 LOC106605972 coding downstream 429175 9744866 ~ 9757901 (+)
G111446 NA non-coding upstream 1507 9308226 ~ 9308477 (+)
G111404 NA non-coding upstream 24385 9284520 ~ 9285599 (+)
G111417 NA non-coding upstream 31627 9277532 ~ 9278357 (+)
G111414 NA non-coding upstream 33137 9276011 ~ 9276847 (+)
G111405 NA non-coding upstream 62351 9245445 ~ 9247633 (+)
G111451 NA non-coding downstream 7179 9322870 ~ 9324339 (+)
G111454 NA non-coding downstream 13417 9329108 ~ 9330101 (+)
G111453 NA non-coding downstream 14578 9330269 ~ 9331616 (+)
G111460 NA non-coding downstream 34088 9349779 ~ 9350032 (+)
G111477 NA non-coding downstream 76073 9391764 ~ 9392169 (+)
LOC110518388 LOC106598833 other upstream 272083 8820359 ~ 9072449 (+)
G110674 NA other upstream 1206064 8073366 ~ 8103920 (+)
G110644 NA other upstream 1374847 7898596 ~ 7935137 (+)
creb5b LOC106573409 other upstream 1603495 7615910 ~ 7706660 (+)
G111788 NA other downstream 124618 9440309 ~ 9444041 (+)
LOC118937659 NA other downstream 458512 9773574 ~ 9776807 (+)
G112697 NA other downstream 1495827 10811518 ~ 10826063 (+)

Expression


Co-expression Network