osr2 (LOC106591507)


Basic Information

Item Value
gene id osr2
gene name LOC106591507
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12299928 ~ 12304950 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036938110.1
GGGCGGGCTGAGCACGCCGAGTGCCCCGAGTCCTGAAAAGTGAAGGGACTTGTGCTCTTCAAGCCCACTACAGCCCAACTCCGAACCGAGCAGAAACAGAGCAGAGTACGGGTCTCCTGCGCTTGGCGTCGCTTGAACTCTATATAGTGAtcgtaacttttttttttacccctcccGAGGACTTCTTTGCCCCACTGTGCGCAAAGTATTACGAGTCGCAAGAGATCTGGTTCTGCGACGGTATGGCGATGAGACTTACATGGTCGAAGTTGGAAAACTTTAGCTAACTTTAAAGTGGAGTTTTTGTCGCCTCTCTTATTAAAGACATTGTGGATTATTGGAACACAGCAGAACTAACTGCGGAGTGACCTTTGGCGTCTGTTTATTGGGGGACCTTCAACGTGGTAGAGTTGTGCCGAGGCCTTAACCGTGAAGCCTTTCGCCGCCGAGATGGGGAGCAAAGCCCTGCCCGCTCCGATCCCTCTCCACCCGTCTCTCCAGCTCACCAACTACTCCTTCCTGCATGCGGTCAACGCATTCCCGGCCGCGGTCGAACAGCTCCAGGGACTGTACGGCCTTAGCGCGGTGCAGACCATGCACATGAACCACTGGACACTAGGCTATCCGCACATGCAGGGACTGAGGTCGACTATCACAGAGATGGCTGCCGCTCAGGGCTTAATGGATCCCCGGTTTACCTTCACGGGGCTACCGTTCGCCGCACACCTCTTCCACCCCAAACAGGGCATTACTCACTTTATCCCCGGGCTGCACAAGGACCGACCACCGCGCTTTGACTTTGCCAACCTGGCGATAGCTGCCACCCAGGAGGACCCGCCGAAGGCTGGGGATCTTTCAAAGTTGACAGCGGGGCTCGGAAGCGCGATATCTGAGTTCAACAAACTGTCGCCTGATAGAAAACCCACCCGGGGAAGGCTTCCGTCAAAAACGAAAAAGGAATTTATTTGCAAGTTCTGTGGCAGGCATTTCACCAAGTCATACAATCTTCTGATCCACGAGAGGACTCACACAGACGAGCGGCCTTATACCTGTGACATCTGCCACAAGGCCTTCCGAAGACAAGACCACCTGAGAGACCACAGATACATCCACTCCAAGGAAAAGCCTTTCAAATGTCAAGAGTGTGGGAAAGGATTTTGTCAGTCTCGAACTTTAGCCGTTCATAAAACATTACATATGCAGACATCAAGCCCTACAGCTGTGACCGCTGCGGAAAGGTGTTTCGGCGCAACTGTGACTTGCGACGGCACAGTTTGACGCACACTCCTCATCAGGACTACTAGCCAATCTGAGAAGGCTGATGAACagccaaaacaaacagacaaacaaacaaaacggaCGTTATTAacagaggagacaacaacatcgACGAAACGTTTTATTTTTCTTCCATTGAAAGAATATAACAAAC
>XM_036938107.1
AGGGCGGGCTGAGCACGCCGAGTGCCCCGAGTCCTGAAAAGTGAAGGGACTTGTGCTCTTCAAGCCCACTACAGCCCAACTCCGAACCGAGCAGAAACAGAGCAGAGTACGGGTCTCCTGCGCTTGGCGTCGCTTGAACTCTATATAGTGAtcgtaacttttttttttacccctcccGAGGACTTCTTTGCCCCACTGTGCGCAAAGTATTACGAGTCGCAAGAGATCTGGTTCTGCGACGGTATGGCGATGAGACTTACATGGTCGAAGTTGGAAAACTTTAGCTAACTTTAAAGTGGAGTTTTTGTCGCCTCTCTTATTAAAGACATTGTGGATTATTGGAACACAGCAGAACTAACTGCGGAGTGACCTTTGGCGTCTGTTTATTGGGGGACCTTCAACGTGGTAGAGTTGTGCCGAGGCCTTAACCGTGAAGCCTTTCGCCGCCGAGATGGGGAGCAAAGCCCTGCCCGCTCCGATCCCTCTCCACCCGTCTCTCCAGCTCACCAACTACTCCTTCCTGCATGCGGTCAACGCATTCCCGGCCGCGGTCGAACAGCTCCAGGGACTGTACGGCCTTAGCGCGGTGCAGACCATGCACATGAACCACTGGACACTAGGCTATCCGCACATGCAGGGACTGAGGTCGACTATCACAGAGATGGCTGCCGCTCAGGGCTTAATGGATCCCCGGTTTACCTTCACGGGGCTACCGTTCGCCGCACACCTCTTCCACCCCAAACAGGGCATTACTCACTTTATCCCCGGGCTGCACAAGGACCGACCACCGCGCTTTGACTTTGCCAACCTGGCGATAGCTGCCACCCAGGAGGACCCGCCGAAGGCTGGGGATCTTTCAAAGTTGACAGCGGGGCTCGGAAGCGCGATATCTGAGTTCAACAAACTGTCGCCTGATAGAAAACCCACCCGGGGAAGGCTTCCGTCAAAAACGAAAAAGGAATTTATTTGCAAGTTCTGTGGCAGGCATTTCACCAAGTCATACAATCTTCTGATCCACGAGAGGACTCACACAGACGAGCGGCCTTATACCTGTGACATCTGCCACAAGGCCTTCCGAAGACAAGACCACCTGAGAGACCACAGATACATCCACTCCAAGGAAAAGCCTTTCAAATGTCAAGAGTGTGGGAAAGGATTTTGTCAGTCTCGAACTTTAGCCGTTCATAAAACATTACATATGCAGGAATCTCCACACAAATGCCCCACATGCGGAAGAACCTTTAATCAAAGAAGTAACCTGAAAACTCACCTTCTCACCCATACAGACATCAAGCCCTACAGCTGTGACCGCTGCGGAAAGGTGTTTCGGCGCAACTGTGACTTGCGACGGCACAGTTTGACGCACACTCCTCATCAGGACTACTAGCCAATCTGAGAAGGCTGATGAACagccaaaacaaacagacaaacaaacaaaacggaCGTTATTAacagaggagacaacaacatcgACGAAACGTTTTATTTTTCTTCCATTGAAAGAATATAACAAAC

Function

NR:

description
protein odd-skipped-related 2

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K09215 OSR, ODD; odd-skipped

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036938110.1 False 1432 mRNA 0.52 4 12299928 12304949
XM_036938107.1 True 1515 mRNA 0.51 4 12299928 12304950

Neighbor

gene id symbol gene type direction distance location
LOC110513475 LOC106592216 coding downstream 9218 11471939 ~ 12290710 (-)
LOC118937706 NA coding downstream 210499 12085564 ~ 12089429 (-)
LOC118937715 NA coding downstream 337334 11961554 ~ 11962594 (-)
LOC118937716 NA coding downstream 339065 11959279 ~ 11960863 (-)
LOC118937710 NA coding downstream 713351 11585559 ~ 11586577 (-)
LOC118944056 NA coding upstream 130519 12435469 ~ 12445157 (-)
LOC118937718 LOC106590816 coding upstream 244349 12549299 ~ 12553519 (-)
LOC118944197 NA coding upstream 312556 12617506 ~ 12617694 (-)
pop1 LOC106561139 coding upstream 334752 12639702 ~ 12673874 (-)
LOC118937724 NA coding upstream 378108 12683058 ~ 12683775 (-)
G114075 NA non-coding downstream 25499 12271706 ~ 12274429 (-)
G114077 NA non-coding downstream 30107 12265543 ~ 12269821 (-)
G114074 NA non-coding downstream 32307 12263854 ~ 12267621 (-)
G114072 NA non-coding downstream 38952 12260506 ~ 12260976 (-)
G114054 NA non-coding downstream 95740 12203685 ~ 12204188 (-)
G114104 NA non-coding upstream 17569 12322519 ~ 12322725 (-)
G114108 NA non-coding upstream 37017 12341967 ~ 12342171 (-)
G114340 NA non-coding upstream 77140 12382090 ~ 12384153 (-)
G114345 NA non-coding upstream 102058 12407008 ~ 12408829 (-)
G114336 NA non-coding upstream 119245 12424195 ~ 12428711 (-)
G113733 LOC106606124 other downstream 947187 11349342 ~ 11352741 (-)
G113720 NA other downstream 974316 11323041 ~ 11325612 (-)
G113712 NA other downstream 987270 11310843 ~ 11312658 (-)
G113688 NA other downstream 1081774 11210473 ~ 11218154 (-)
G114390 NA other upstream 279077 12584027 ~ 12585140 (-)
G114402 NA other upstream 305719 12610669 ~ 12613680 (-)
G114424 NA other upstream 402877 12707827 ~ 12709315 (-)
G114442 NA other upstream 430364 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 787142 13086169 ~ 13094428 (-)

Expression


Co-expression Network