LOC118937718 (LOC106590816)


Basic Information

Item Value
gene id LOC118937718
gene name LOC106590816
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 12549299 ~ 12553519 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035115.1
TATAACAGTAATCCATCATTCAGACACACTGAAATTCTAACCAGTCAGAGTACATGATATCTAAtcattcaattgatttgacaacGGATTAGTTGAAAAACAAACCCACGTTTTCTGCCTCACGAATCAATCCTAACCTTTACACGTCTCATCCGTCTTCACTAACGGCTCAGCTGGAGAGCTCTCAGCCGGTTAACGGTGAACGGTTACCTCATTTGAAGATGACGGCCTCTGTATAACGCTCGGGCGCACACGCTTTTAATGATTCGTGACTTCTCCTCCCTCGCGGAGAGCAGAGTAAAGGAGTCGGTCCTTTCTGCACCTTTCTCCGAGAAGAGGGAGGTGTTGAATTCGCTCGGGAAGGCGAGGGCGGAACGGTAGTTTACAGAAAGTGGTTGCTACTGCACGGCAACAGAGCTGAGGTCTAACCGCTACTAGACGTCACAATGGAGATTCATCCGAGGAATTCCCTCACTACGGAAACGGAAGCATCTGGAGTGTGTTAGTTACAACGGGAGATTAAGATGTGGCGCGAGCGCTCACGATTTAACGATGTAAATAGTCTATGGGGGAGTCTGTCTGTGGGGCGGACACGTTTTATgtctggagaagagagagacaacctTGTTCCGCGCTGACGGCTCCGTTgaaacccctctctctatctaaccTGGGCAGTAACGCATGAccgactgacagacagacagacagacagacagcattggTTCAGTCTTCCACGCTAGCTGGAGGAGGCACAGAGAGGAGGCACAGAGAGGAGGCATCTATCTACGTCTATCCAAGTTGCTCAGCAGCTCGGTGAAGCACAATGCCCTCGTAGGAGCTGATATGCAGAAGCGTTGTGTAGGAGACTCGGGAAAAGGGCGTTGAATAAAgTACTTCTCCACTCCCCAGTCCGTTCACCCCTCGCCAGACATGACTGGTCAGAGCCTGGAGGAGCTGACAGCAGCCTATGAGGATCACACCGTGCGCATCAATGTGGGAGGGTTCAAGAAGAGGCTGTTCTCCAACACTCTGTCTCGCTTCCCGGAGACCCGTCTGGCTCGTCTGCTACAGTGCCAATCAAAAGAGTCGATACTAGAACTCTGCGACGACTACGACGACGCGGAAAAGGAGTTTTATTTCGACAGGAACCCGGCTCTCTTCCCTTACGTGTTGAATTTCTACAACACCGGGAAGCTGCACGTCATGGCAGAGTTGTGCATCTTCTCCTTCAGCCAGGAGATCGAGTACTGGGGCATCAATGAATTCTTCATCGACTCGTGTTGCAGCGGCGCCTACCACTGCCGAAAGATGGATCCTAACCGCGGGGAGGACTGGGACGACTGCCGGAGCGACGAGGGCAGCACCACGTCATCGTTCGACGAGATTCTAGAGTTCTATAACGACGCCACTAAGTTCGATAAGCAGCCGTTGGGGAGCGTCCGCAGGCGGATCTGGTTGATCCTGGATAACCCGGGGTACTCCGTCGCCAGCCGAGTCATCAGTATCCTCTCTATCCTGGTCGTGTTGGGTTCCATAACCACCATGTGCATGAACAGCATGGCTGAGTTCACCCTGGTGGACAGGGAGGGGACGCCTCACGAGGACCCCAGGTTTGAAACGGTGGAACACTTTGGTATCGGCTGGTTCACCTTGGAGCTGGTGGCCCGGTTCACAGTCGCTCCAGATCTTATCCATTTCTTCAAGCATCCGTTGAACTTAATAGACCTCGTGTCGATATTACCGTTCTACCTGACGCTCTTCATCGACCTGGTGGCCGAGAGCAGCCCGGCGCTGGCCAATCTGGGGCGCGTGGCACAGGTGCTACGGCTGATGAGGATCTTCCGTATCCTGAAGCTGGCGCGTCACTCCACGGGGCTGCGCTCTCTGGGCGCCACGCTGAGAAACAGCTACAAGGAGGTGGGGTTGCTCCTGCTCTACCTGGCGGTGGGCGTGTCTTTCTTCTCTGTCATGGCCTACACCGTGGAGAAGGACAGCGAGGACTTCTCTACCGTCCCAGCATGCTGGTGGTGGGCCACGGTGAGCATGACCACGGTGGGGTACGGAGACGTGGTCCCGGTATCTATAGCCGGCAAGATGACGGCCTCGGCCTGTATCCTGGCAGGCATCCTGGTGGTTGTGCTTCCCATCACCCTCATATTCAACAAGTTCTCTCTCTTCTACAAGAGACAGAAACAGTTAGAGATCGCTATGCGCAGCTGTGACTTCGACCAGGAGATCAAAGAGAACCTTCCCTCTGTCAATCTGAGGAACTACTATGCACACAAGGTGAAATCTCTCATGGCCAGTCTGTCCAATATCAACCGGAGCCTGCCCAGTGAACACAGTCTGAACGAGATGTCAATACATTAAGATCTGTGGATCAACAGACTGCCCCCCCACCCCGCTGGCCTTATAAGGAAGGACGTGAccgaaggagaggagaaacatgGTGGAAGAGGTAGTGCTGTTTCTGTGTAGCCCTTGTTGTTGAATAGAGCTACATGGGAAGCTGAAGTTTAGTTTGACTGACAGGCGAGGGCGTGGGCGGGCCAACCAACATCACAACCTTTCTATTGGGAGAATCACAtcgaatcctctctctcttttacattcTTCTCAAatcccattggatgagaaagccagaggtccttCCCCTCTGACCTTTCTAATCCAATGGGTTTTTTGAGAAGGCTTTTCGAGGAGAGAGGACACAAGATATCAAAGAAAAACAATGGAGATTCTCCCAATGATTCCTCTTCCACCTTTTCATTCACCTCAAGTGTTTTAACAGTGTGGTTCACCACTCGGGGTCAGCCCTAGGACCTGGGGTTCATCACTAGTCACGAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGTCACGAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGTCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGAAATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGCCATGGgGTTCATCACTAGGGGTCAACCCTAGGTCATGGACTTCATCACTAGTCACTAAGTGTCCCCTAAAGTTTAGTCATTGTGATTTTGCCCAAAGTAGAGCTTTACTCATGTTCTCCTGTTATGAGGTACTGTTGATGTGTAACTGTTGTACTGCAATGAGATGATCAATACAAGATGTTGATACCTTCAGATGTCTAGAAACCCATATTAAAGATCAATACATATTGATACCTTCAGATACCACAtaccacaatccatgtctcaattgtttc
>XM_036938124.1
TATAACAGTAATCCATCATTCAGACACACTGAAATTCTAACCAGTCAGAGTACATGATATCTAAtcattcaattgatttgacaacGGATTAGTTGAAAAACAAACCCACGTTTTCTGCCTCACGAATCAATCCTAACCTTTACACGTCTCATCCGTCTTCACTAACGGCTCAGCTGGAGAGCTCTCAGCCGGTTAACGGTGAACGGTTACCTCATTTGAAGATGACGGCCTCTGTATAACGCTCGGGCGCACACGCTTTTAATGATTCGTGACTTCTCCTCCCTCGCGGAGAGCAGAGTAAAGGAGTCGGTCCTTTCTGCACCTTTCTCCGAGAAGAGGGAGGTGTTGAATTCGCTCGGGAAGGCGAGGGCGGAACGGTAGTTTACAGAAAGTGGTTGCTACTGCACGGCAACAGAGCTGAGGTCTAACCGCTACTAGACGTCACAATGGAGATTCATCCGAGGAATTCCCTCACTACGGAAACGGAAGCATCTGGAGTGTGTTAGTTACAACGGGAGATTAAGATGTGGCGCGAGCGCTCACGATTTAACGATGTAAATAGTCTATGGGGGAGTCTGTCTGTGGGGCGGACACGTTTTATgtctggagaagagagagacaacctTGTTCCGCGCTGACGGCTCCGTTgaaacccctctctctatctaaccTGGGCAGTAACGCATGAccgactgacagacagacagacagacagacagcattggTTCAGTCTTCCACGCTAGCTGGAGGAGGCACAGAGAGGAGGCACAGAGAGGAGGCATCTATCTACGTCTATCCAAGTTGCTCAGCAGCTCGGTGAAGCACAATGCCCTCGTAGGAGCTGATATGCAGAAGCGTTGTGTAGGAGACTCGGGAAAAGGGCGTTGAATAAAgTACTTCTCCACTCCCCAGTCCGTTCACCCCTCGCCAGACATGACTGGTCAGAGCCTGGAGGAGCTGACAGCAGCCTATGAGGATCACACCGTGCGCATCAATGTGGGAGGGTTCAAGAAGAGGCTGTTCTCCAACACTCTGTCTCGCTTCCCGGAGACCCGTCTGGCTCGTCTGCTACAGTGCCAATCAAAAGAGTCGATACTAGAACTCTGCGACGACTACGACGACGCGGAAAAGGAGTTTTATTTCGACAGGAACCCGGCTCTCTTCCCTTACGTGTTGAATTTCTACAACACCGGGAAGCTGCACGTCATGGCAGAGTTGTGCATCTTCTCCTTCAGCCAGGAGATCGAGTACTGGGGCATCAATGAATTCTTCATCGACTCGTGTTGCAGCGGCGCCTACCACTGCCGAAAGATGGATCCTAACCGCGGGGAGGACTGGGACGACTGCCGGAGCGACGAGGGCAGCACCACGTCATCGTTCGACGAGATTCTAGAGTTCTATAACGACGCCACTAAGTTCGATAAGCAGCCGTTGGGGAGCGTCCGCAGGCGGATCTGGTTGATCCTGGATAACCCGGGGTACTCCGTCGCCAGCCGAGTCATCAGTATCCTCTCTATCCTGGTCGTGTTGGGTTCCATAACCACCATGTGCATGAACAGCATGGCTGAGTTCACCCTGGTGGACAGGGAGGGGACGCCTCACGAGGACCCCAGGTTTGAAACGGTGGAACACTTTGGTATCGGCTGGTTCACCTTGGAGCTGGTGGCCCGGTTCACAGTCGCTCCAGATCTTATCCATTTCTTCAAGCATCCGTTGAACTTAATAGACCTCGTGTCGATATTACCGTTCTACCTGACGCTCTTCATCGACCTGGTGGCCGAGAGCAGCCCGGCGCTGGCCAATCTGGGGCGCGTGGCACAGGTGCTACGGCTGATGAGGATCTTCCGTATCCTGAAGCTGGCGCGTCACTCCACGGGGCTGCGCTCTCTGGGCGCCACGCTGAGAAACAGCTACAAGGAGGTGGGGTTGCTCCTGCTCTACCTGGCGGTGGGCGTGTCTTTCTTCTCTGTCATGGCCTACACCGTGGAGAAGGACAGCGAGGACTTCTCTACCGTCCCAGCATGCTGGTGGTGGGCCACGGTGAGCATGACCACGGTGGGGTACGGAGACGTGGTCCCGGTATCTATAGCCGGCAAGATGACGGCCTCGGCCTGTATCCTGGCAGGCATCCTGGTGGTTGTGCTTCCCATCACCCTCATATTCAACAAGTTCTCTCTCTTCTACAAGAGACAGAAACAGTTAGAGATCGCTATGCGCAGCTGTGACTTCGACCAGGAGATCAAAGAGAACCTTCCCTCTGTCAATCTGAGGAACTACTATGCACACAAGGTGAAATCTCTCATGGCCAGTCTGTCCAATATCAACCGGAGCCTGCCCAGTGAACACAGTCTGAACGAGATGTCAATACATTAAGATCTGTGGATCAACAGACTGCCCCCCCACCCCGCTGGCCTTATAAGGAAGGACGTGAccgaaggagaggagaaacatgGTGGAAGAGGTAGTGCTGTTTCTGTGTAGCCCTTGTTGTTGAATAGAGCTACATGGGAAGCTGAAGTTTAGTTTGACTGACAGGCGAGGGCGTGGGCGGGCCAACCAACATCACAACCTTTCTATTGGGAGAATCACAtcgaatcctctctctcttttacattcTTCTCAAatcccattggatgagaaagccagaggtccttCCCCTCTGACCTTTCTAATCCAATGGGTTTTTTGAGAAGGCTTTTCGAGGAGAGAGGACACAAGATATCAAAGAAAAACAATGGAGATTCTCCCAATGATTCCTCTTCCACCTTTTCATTCACCTCAAGTGTTTTAACAGTGTGGTTCACCACTCGGGGTCAGCCCTAGGACCTGGGGTTCATCACTAGTCACGAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGTCACGAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGTCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGACTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGAAATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGCTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGACATGGGGTTCATCACTAGGGGTCAACCCTAGGCCATGGggttcatcactagtcactaGGGGTCAACCTTAGGCCATGAGGTTCATCACTAGGGGTCAACCCTAGGTCATGGACTTCATCACTAGTCACTAAGTGTCCCCTAAAGTTTAGTCATTGTGATTTTGCCCAAAGTAGAGCTTTACTCATGTTCTCCTGTTATGAGGTACTGTTGATGTGTAACTGTTGTACTGCAATGAGATGATCAATACAAGATGTTGATACCTTCAGATGTCTAGAAACCCATATTAAAGATCAATACATATTGATACCTTCAGATACCACAtaccacaatccatgtctcaattgttt

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0051260 protein homooligomerization biological_process
GO:0008076 voltage-gated potassium channel complex cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04932 KCNS2, KV9.2; potassium voltage-gated channel delayed-rectifier subfamily S member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035115.1 False 3685 mRNA 0.52 3 12549299 12553519
XM_036938124.1 True 3724 mRNA 0.52 2 12549300 12553519

Neighbor

gene id symbol gene type direction distance location
LOC118944056 NA coding downstream 104142 12435469 ~ 12445157 (-)
osr2 LOC106591507 coding downstream 244349 12299928 ~ 12304950 (-)
LOC118937706 NA coding downstream 459870 12085564 ~ 12089429 (-)
LOC118937715 NA coding downstream 586705 11961554 ~ 11962594 (-)
LOC118937716 NA coding downstream 588436 11959279 ~ 11960863 (-)
LOC118944197 NA coding upstream 63987 12617506 ~ 12617694 (-)
pop1 LOC106561139 coding upstream 86183 12639702 ~ 12673874 (-)
LOC118937724 NA coding upstream 129539 12683058 ~ 12683775 (-)
LOC118937723 LOC106561136 coding upstream 129574 12683093 ~ 12715610 (-)
LOC110525147 LOC106570794 coding upstream 260131 12813650 ~ 12890396 (-)
G114364 NA non-coding downstream 73530 12474320 ~ 12475769 (-)
G114362 NA non-coding downstream 82899 12464565 ~ 12466400 (-)
G114361 NA non-coding downstream 85141 12462746 ~ 12464158 (-)
G114359 NA non-coding downstream 93262 12455762 ~ 12456037 (-)
G114336 NA non-coding downstream 120588 12424195 ~ 12428711 (-)
G114389 NA non-coding upstream 24340 12577859 ~ 12578364 (-)
G114391 NA non-coding upstream 34601 12588120 ~ 12591840 (-)
G114399 NA non-coding upstream 51452 12604971 ~ 12608944 (-)
G114401 NA non-coding upstream 65002 12618521 ~ 12619052 (-)
G114400 NA non-coding upstream 69770 12623289 ~ 12624052 (-)
LOC110513475 LOC106592216 other downstream 890631 11471939 ~ 12290710 (-)
G113733 LOC106606124 other downstream 1196558 11349342 ~ 11352741 (-)
G113720 NA other downstream 1223687 11323041 ~ 11325612 (-)
G113712 NA other downstream 1236641 11310843 ~ 11312658 (-)
G113688 NA other downstream 1331145 11210473 ~ 11218154 (-)
G114390 NA other upstream 30508 12584027 ~ 12585140 (-)
G114402 NA other upstream 57150 12610669 ~ 12613680 (-)
G114424 NA other upstream 154308 12707827 ~ 12709315 (-)
G114442 NA other upstream 181795 12735314 ~ 12739157 (-)
LOC110507534 LOC106606051 other upstream 538573 13086169 ~ 13094428 (-)

Expression


Co-expression Network