G113733 (LOC106606124)


Basic Information

Item Value
gene id G113733
gene name LOC106606124
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11349342 ~ 11352741 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU130157
CTGCATGGTTAGCCTTGTCTCTCTGTGGGAGCTGGTCAGCTGGCTGtggtgagagtgtgtgtgggaggaGTGTCCAGAGGCAGGGCCTGACTGATCCCAGTAATCCTTGTCCATCATCTCCTCCAGAAGATCCAtgagttcctcttcctgtctgggGCTGGGACCAGGgttagggctggggctgggaccagggttagggctagggctgAGACCAGGGTTTGGTCTGGGGCTGAGACGGGGGCTGGGTCCAGGGTTAGGGCTGGGGCTGAGACGGGGGCTGGGTCCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGACTGAGACCAGGGTTAGGGCTGGACTCAGTGGGTTGGGTATGGTTCTGGTACCGCTGGCTCCAGGCAGTGTTCTCATAGCTCTTCAGGATCCTCTCCACAGCTCCGTAATTAGACCTGGAGTCAGATGGACGTAACGCAGCCAGAGTCAAGGGCTTCCAGGGCTGGTCGCTCATTACACCACGGAGTCCTGACCCCCCAGGCACACGCAGTCCTGACCCCCCAGGCACACGGAGTCCTGACCCCACAGATCCAGCTTTAAGGATGTCCTGCGTTGTGGTTGAGCGACACCCAGGTTGCCCAACCTGCTTCGGCCTGAGGTTTGTAGGAGGCTGGGGCGCTGGGCATGACTTAACGGAATGAGGCCTCGCTCCTTGGGCCGTGATGTCCCTCTTAGGACTGGCACTCACCTCTGGTCCTGGAGCCGTGTGTGTAGTCTGGGCAGGCTGCTTGTATTCACTAGAGATGGACCTGTGCAGTGTGGGCTTAGACAGGCTGTTGGGGGGTCCAGCTTTGTGTTTGACCTCAGGGCAGCGTGTTGCCGGGTTAGAAGGCATGTTCCTAAACGCAACTTCTGGGCGTTGGGGTGAAAGGTCAGAGGTGGCAGGGGGGTCAAAGGTCCTGACGGTGACCCCTGGATGAGTGTCAGTTGGGGGCAGGGCCTGGCTCAGTTTGATCCCTGAACTCAGCTTCTGAGCTGTGATGTCACAGATTACCTCCTTCTGTCTGACCTCTGTGGCGTGCCGCGGCGGGAGGTCAAAGTTCGTCTCCCTGTCGACCCCGTGTGTGACCTCGCCACATACCGTCGTACCGTCTGGTATGCCCCTTTTAGAGACACCCGCTGATGTAAAACTGTCCTCTACATCATCGTCCTCCATCCCTCGACCCATCTCAGCCTGGAAGAGAGTCCTGTTAAACTCAGCAGTGGCCTGTTCCAGCATCATATTCCTACTGTGGCCTGAAGGGTTGGAGTCTGGAGGGTTGGAGCCTGGAGGGTTGGAGCCTGGAGGGTTGGAGCCTGGAGGGGGTAACTCTAAGGTAAGGTCAAGACAGATGTGTGAAACTGTTAGGTCTTTGTTTCCAGGTTgtatatgactctctctctcagggcttcTAGGACTTCTAGGACTAGGTTTCTCAATGGGCCTGTAGTCGTGGATCAAGTCCTTCCCAGCAGCACTCACTATGTTGACTTCAGACAGGCTCTTCTGGACAGGCACGTAGGTGGACGACTTGCTGCTGCCGAAGGACCAGCGGTTGTGGCAACAGCCCACGTTGCAACGGGAGTTAACGGGAACAGCACAGGTGGTAAACCCCGCCTCCGTCAGAACTTTCCCCTCGTTCTCCTGCAGCATCGCCTCGAACTTCCTCACTATCGATGGGCTGCTGCTGCACTTCCTGTCTAACAGGAGACAGGGGCTGTGGCACTTCCTGCCTGAGCCACTGAGGGATTCTGGGACGTGTAGTTGTAGTTCAGGGGAGGGGCTGGCGAGGTACCATGATGTTGTCcgaggagggataggaggaggaaCCAGCAGAGGGGGGAGCGGAggtgcttctctctccctctcagaggGCTTGGATGTGGGGTCCTTGAGGTGACTGGGGCCCCTGGCGGGCTCCTTGAGGTGACTGGGGCCCCTGTCGGGCTCCTTGAGGTGACTGGGGCCCCTGTCGGGGTCCTTGCGGTGACTGGGGCCCCTGGTGGGGTCCTTCCTGATGGACAGCCAGTTCTCCTCTTCCAGGGCCCTGAGGTCAGCTACCAGCTGCGTCAGGTTGAAGGCAGggtcctccattctctctctggtCGTAACATGATCCACCTCGGGGAAATACGAGGACTCGGTTCGACCCTCTTGTCCCCTCCGGACTTCCTGCTGATCTCATCCTGGTAGCTACACAGCTCTTCACTCACACGGGCTATCTCCTTCAGggcctagagagaggagagagggagacagaaggagagaga
>TU130159
CTGCATGGTTAGCCTTGTCTCTCTGTGGGAGCTGGTCAGCTGGCTGtggtgagagtgtgtgtgggaggaGTGTCCAGAGGCAGGGCCTGACTGATCCCAGTAATCCTTGTCCATCATCTCCTCCAGAAGATCCAtgagttcctcttcctgtctgggGCTGGGACCAGGgttagggctggggctgggaccagggttagggctagggctgAGACCAGGGTTTGGTCTGGGGCTGAGACGGGGGCTGGGTCCAGGGTTAGGGCTGGGGCTGAGACGGGGGCTGGGTCCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGGCTGAGACCAGGGTTAGGGCTGGGACTGAGACCAGGGTTAGGGCTGGACTCAGTGGGTTGGGTATGGTTCTGGTACCGCTGGCTCCAGGCAGTGTTCTCATAGCTCTTCAGGATCCTCTCCACAGCTCCGTAATTAGACCTGGAGTCAGATGGACGTAACGCAGCCAGAGTCAAGGGCTTCCAGGGCTGGTCGCTCATTACACCACGGAGTCCTGACCCCCCAGGCACACGCAGTCCTGACCCCCCAGGCACACGGAGTCCTGACCCCACAGATCCAGCTTTAAGGATGTCCTGCGTTGTGGTTGAGCGACACCCAGGTTGCCCAACCTGCTTCGGCCTGAGGTTTGTAGGAGGCTGGGGCGCTGGGCATGACTTAACGGAATGAGGCCTCGCTCCTTGGGCCGTGATGTCCCTCTTAGGACTGGCACTCACCTCTGGTCCTGGAGCCGTGTGTGTAGTCTGGGCAGGCTGCTTGTATTCACTAGAGATGGACCTGTGCAGTGTGGGCTTAGACAGGCTGTTGGGGGGTCCAGCTTTGTGTTTGACCTCAGGGCAGCGTGTTGCCGGGTTAGAAGGCATGTTCCTAAACGCAACTTCTGGGCGTTGGGGTGAAAGGTCAGAGGTGGCAGGGGGGTCAAAGGTCCTGACGGTGACCCCTGGATGAGTGTCAGTTGGGGGCAGGGCCTGGCTCAGTTTGATCCCTGAACTCAGCTTCTGAGCTGTGATGTCACAGATTACCTCCTTCTGTCTGACCTCTGTGGCGTGCCGCGGCGGGAGGTCAAAGTTCGTCTCCCTGTCGACCCCGTGTGTGACCTCGCCACATACCGTCGTACCGTCTGGTATGCCCCTTTTAGAGACACCCGCTGATGTAAAACTGTCCTCTACATCATCGTCCTCCATCCCTCGACCCATCTCAGCCTGGAAGAGAGTCCTGTTAAACTCAGCAGTGGCCTGTTCCAGCATCATATTCCTACTGTGGCCTGAAGGGTTGGAGTCTGGAGGGTTGGAGCCTGGAGGGTTGGAGCCTGGAGGGTTGGAGCCTGGAGGGGGTAACTCTAAGGTAAGGTCAAGACAGATGTGTGAAACTGTTAGGTCTTTGTTTCCAGGTTgtatatgactctctctctcagggcttcTAGGACTTCTAGGACTAGGTTTCTCAATGGGCCTGTAGTCGTGGATCAAGTCCTTCCCAGCAGCACTCACTATGTTGACTTCAGACAGGCTCTTCTGGACAGGCACGTAGGTGGACGACTTGCTGCTGCCGAAGGACCAGCGGTTGTGGCAACAGCCCACGTTGCAACGGGAGTTAACGGGAACAGCACAGGTGGTAAACCCCGCCTCCGTCAGAACTTTCCCCTCGTTCTCCTGCAGCATCGCCTCGAACTTCCTCACTATCGATGGGCTGCTGCTGCACTTCCTGTCTAACAGGAGACAGGGGCTGTGGCACTTCCTGCCTGAGCCACTGAGGGATTCTGGGACGTGTAGTTGTAGTTCAGGGGAGGGGCTGGCGAGGTACCATGATGTTGTCcgaggagggataggaggaggaaCCAGCAGAGGGGGGAGCGGAggtgcttctctctccctctcagaggGCTTGGATGTGGGGTCCTTGAGGTGACTGGGGCCCCTGGTGGGGTCCTTGAGGTGACTGGGGCCCCTGGTGGGCTCCTTGAGGTGACTGGGGCCCCTGGCGGGCTCCTTGAGGTGACTGGGGCCCCTGTCGGGCTCCTTGAGGTGACTGGGGCCCCTGTCGGGGTCCTTGCGGTGACTGGGGCCCCTGGTGGGGTCCTTCCTGATGGACAGCCAGTTCTCCTCTTCCAGGGCCCTGAGGTCAGCTACCAGCTGCGTCAGGTTGAAGGCAGggtcctccattctctctctggtCGTAACATGATCCACCTCGGGGAAATACGAGGACTCGGTTCGACCCTCTTGTCCCCTCCGGACTTCCTGCTGATCTCATCCTGGTAGCTACACAGCTCTTCACTCACACGGGCTATCTCCTTCAGggcctagagagaggagagagggagacagaaggagagaga

Function

NR:

description
protein piccolo-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU130157 False 2390 TUCP 0.44 4 11349342 11352741
TU130159 True 2450 TUCP 0.38 4 11349342 11352741

Neighbor

gene id symbol gene type direction distance location
prelid3a LOC106593866 coding downstream 87833 11196145 ~ 11261793 (-)
lratd2b LOC106573048 coding downstream 180704 11165113 ~ 11168638 (-)
LOC118937688 NA coding downstream 289869 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 348220 10840566 ~ 11001122 (-)
LOC110514530 LOC106572903 coding upstream 45351 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 119198 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 231467 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 232818 11585559 ~ 11586577 (-)
LOC118937716 NA coding upstream 606538 11959279 ~ 11960863 (-)
G113731 NA non-coding downstream 1736 11346565 ~ 11347606 (-)
G113730 NA non-coding downstream 3000 11345612 ~ 11346342 (-)
G113727 NA non-coding downstream 10229 11338596 ~ 11339113 (-)
G113725 NA non-coding downstream 12075 11335970 ~ 11337267 (-)
G113721 NA non-coding downstream 22975 11325730 ~ 11326367 (-)
G113734 NA non-coding upstream 2832 11355573 ~ 11356546 (-)
G113737 NA non-coding upstream 14072 11366813 ~ 11368995 (-)
G113741 NA non-coding upstream 18522 11371263 ~ 11373006 (-)
G113742 NA non-coding upstream 20624 11373365 ~ 11373605 (-)
G113743 NA non-coding upstream 21811 11374552 ~ 11374779 (-)
G113720 NA other downstream 23730 11323041 ~ 11325612 (-)
G113712 NA other downstream 36684 11310843 ~ 11312658 (-)
G113688 NA other downstream 131188 11210473 ~ 11218154 (-)
G113096 NA other downstream 327608 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 541098 10736729 ~ 10808244 (-)
G114390 NA other upstream 1231286 12584027 ~ 12585140 (-)
G114402 NA other upstream 1257928 12610669 ~ 12613680 (-)
G114424 NA other upstream 1355086 12707827 ~ 12709315 (-)
G114442 NA other upstream 1382573 12735314 ~ 12739157 (-)

Expression


Co-expression Network