lratd2b (LOC106573048)


Basic Information

Item Value
gene id lratd2b
gene name LOC106573048
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11165113 ~ 11168638 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021586929.2
GGCTCGCTGCAACCAGCCGGTAGTTTCAGTTCACACAGAAACCACGGTGGAGGCGGCGGCGTGTAGCCGGAGTCTTCTGAGAAAGGAGACCGAAAACCAAGCTGTAGACAGTTATATGTCGTTTCCTGTGGATGATAATAACGAATGGCTGGCTCGTCGGTGATGTACTTTCAATATCTACAAGACCTTGGGGGTTGATATCCAGAATCTTTTTGGACATCATCCCGGTATTGTATTTTTGACCGGAAGCATTTGATGATGGATTGGAACCGTCCCACACCTTGAAATAAGTCCTACCCGGATCGAATTACCGGTCGTGTTAGGTTTCCTACCTAAAGCACCGACCTCACCACCTCCGCGCCTGGAACAGGTGGAAACGTGTCATTTATTTAGTTGTTGTCACCACCCACCTGGAAGTGGCATGGGTAACCAGGTTGAGAAACTGACACATCTGACTTATGACAATGTTCCGACCGCGGATCCCAACGGGTTTGACACGGAGGATGAGCTGGGGCCCCGGATCGGAGTGTCCTACATCTTCTCCGCGGACGACGACGAACAAGAGGAACGTGTTGACGGACCGGACAAGGATCAGAACGAGGAAGAGAAACAATACGATAACTGCAACGAGCTGGAGTGTGTTGTGTACTACCGTGACGAATCTGTGTACGAGAAAAATCTCAAACTCTCTGATATGAGCACGTATTCGACTGAGAATCTTTTAAACAAGTGCATACCGGGGGATTTGGTGGAGTTCGTGGCTACGGGCCAGTACCCTCACTGGGTTGTGTACGTGGGCGACTTTCAGGTCGTTCACCTGCACCGGGCTGAAATCAAGAATAATTTCCTGACAGATGCCAGTCAAGGAAAGCGAGGCAGGATAGTTAACGGGCTGTATAAATTCCGCGCTCTGCCTCCCGAGGTGGTGGTGCAGAACGCGGTGCAGCAAGTaggaacgagagacagagagctggactGGAGGAACTCTGAGTGCTTTGCTGCGTGGTGCAGGTTCGGGAAGAGGGAATTTAAAATAGGAGGAGAGATCCGTATCGGAAAGCAGCCCTACAGGTTGAAAATGTTGTTTTCTGAAAAGAAGAGTCACGTCCTTGAATTTCAGAGTTTTGACGACTTGAtcatggagaagaggagaaacgATCAGATAGGCAGAGATGCGGTGACGCAAGAGTTAGCGAACCATCTCAACGCAACCGATGCGGAAATTAAGGACGACTTTCATCAGAGTGTGAACTGAAAGACCCCAAGAGAAACGGATGGTAATGTCCAGTGGACGACTTGGGCAGCGTTCAGCTTTAGGATACAGGAGCCCACGTGACTAGAACACTGTTGGAAatcctgttttgttttttttggcGCAAAGGCCGTGCGCCTTTTTATGCATACCAAAACATTTATATTGGTTTGAGACGAAGTAGCAACTCAACCAATGAAGTGCATTTAATTTACCAACAGTTTCTACCTTGAGACAAGGACACCTTGAAACCCACAAAAATTCCCattaatactgaacaaaaatctaaactcatcatgcaacaatttcaaagaattTACTGAGTTatggttcatataaggaaatcagtcgcTTGAAATAAATTGATTAGGCCCTAGTATATGGATTTAGGGTCTAATGTTCACTATCGGATGTAAacaaatatgcatctgttggtcacagatacattatttttaatttttaaatgagcctcaggatctcgtcacggtatctctggaCATTCCAAATTGCCCTCGATTTAAAATGCCATTGTGTTCGTTgtgtccgtagcttatacctggcccataccataaccccaccgccaccacggggcactctgttcacacaACGTTGACGTCagtaaaccgctcgcccacacgacgccgtacacgtggtctgcgggtTTTGAGGTTGGTTGGACATATACTGCGAAATTCTCTAAAAACAACGTTAGATGTGGGTTATGTTAGAGAAATCAAAATTAAATTCTCTgataacagctctggtggaccttcctgcagtcagcatgacaagtgtacgctccctcaacttgagacatatgtgacattgtgttgtgtgacaaaactgcactttttttttgtgtgtgtggcctttttattgtccccccagcacaaggtgcacctgtgtaattatcattctgtttaatcagcttcttgatatgccacacctgtcaggtgaacggattatcttgGCACAGGAGAGAAATGTTCCCTAACAGGGATGTCAACAAATTTGTGCCAGAAaatgtgtgtatggaacatttcttgtCTCTTTTTATTCCAGCTCATGAATCATGGGAAAAAAACACACTTTTACACGTTGcttttttaatatttttgttcagtgtagcttcAAGTCGTCCCATATGGACTGGTCTCTGTTGTTTTCTACCCATCTGAAGAGGAGCAAAGCCTTTCCTATAGCCTTTCATATCTGTCTGTTTCACTACGTGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGGACAACCCCTGGTGTTTTAGACcaatggagagagagcagaacatGTTCCTGTACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGACCATGCTCCTGGACAACCCCTGGTGTTTTAGACCAATGGAGAGGGAGCAGAACATGCTCCTGTACAACCCCTGGTGTTTTAGACcaatggagagggaggaagcagAACATGTTCCTGTACAACCCCTGGTGTTTTAGACcaatggagagggaggaagcagAACATGTGACCCATTTGACATTTCACTTTCCGGATTCCCTACTGTGACTTTATGATTCCCTTTCTGACCTGTCTGACCGGTTATTGTATTCACAACCACAAttctgtgtgtcccaaatggctccctatatagtgcactacttttggccagaggcCTATGGTCCcttgtcaaatgtagtgcactacttactatacagggtgccatttgggatgtttcCTGGCTGCACTTTAATTGAGTCTATTATTGATTTTATGGGTTttttaaaaactgtttttttttttttttttggaggtGAATGTTTGTATGAGGAAATATATGGAAATAAATATCTATTTAACCTAAA

Function

NR:

description
protein FAM84B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021586929.2 True 3338 mRNA 0.46 2 11165113 11168638

Neighbor

gene id symbol gene type direction distance location
LOC118937688 NA coding downstream 105640 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 163991 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 283723 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 339101 10811513 ~ 10826012 (-)
eif3h LOC100196680 coding downstream 356880 10736729 ~ 10808244 (-)
prelid3a LOC106593866 coding upstream 79399 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 229454 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 303301 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 415570 11584208 ~ 11585455 (-)
LOC118937710 NA coding upstream 416921 11585559 ~ 11586577 (-)
G113669 NA non-coding downstream 7363 11157517 ~ 11157750 (-)
G113666 NA non-coding downstream 15263 11147950 ~ 11149850 (-)
G113662 NA non-coding downstream 27423 11136533 ~ 11137690 (-)
G113661 NA non-coding downstream 31151 11133651 ~ 11133962 (-)
G113660 NA non-coding downstream 32183 11132079 ~ 11132930 (-)
G113671 NA non-coding upstream 309 11168947 ~ 11169149 (-)
G113672 NA non-coding upstream 1503 11170141 ~ 11170720 (-)
G113673 NA non-coding upstream 3514 11172152 ~ 11172356 (-)
G113675 NA non-coding upstream 6249 11174887 ~ 11178729 (-)
G113680 NA non-coding upstream 20450 11189088 ~ 11213870 (-)
G113096 NA other downstream 143379 11021041 ~ 11021734 (-)
G112965 NA other downstream 446455 10648265 ~ 10718658 (-)
G112928 NA other downstream 594305 10570442 ~ 10570808 (-)
G112567 NA other downstream 818178 10346471 ~ 10346935 (-)
G113688 NA other upstream 41835 11210473 ~ 11218154 (-)
G113712 NA other upstream 142205 11310843 ~ 11312658 (-)
G113720 NA other upstream 154403 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 180704 11349342 ~ 11352741 (-)

Expression


Co-expression Network