G113661



Basic Information


Item Value
gene id G113661
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 11133651 ~ 11133962 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU130023
aaaaaaaaaaaaaaatgttttaaaggaGATTTATGATGAGGGCTTTGTTACCTGGCAACCATGGAGACAACTCTCAGACAGATCACTGTGAGGGTTTAATAAGATCTCTCTCTCACAGCTGTCTTTTTTAAAAACCATCCTTTACCGATCTCACCGTATTAAAAAAAGGACCTTCTGCTTTTATTCCAAGTGTTCCCCTCGACTTCTGGAATTGttcccccgtcctctcctctgtcagtctAATTGTCGGGTGGTGAATATATTGCCCTCTTGCCTGGCAGCCTCACTGAGAAACATTCACTCTAATCTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU130023 True 312 lncRNA 0.36 1 11133651 11133962

Neighbor


gene id symbol gene type direction distance location
LOC118937688 NA coding downstream 74178 11058263 ~ 11060049 (-)
LOC110511734 LOC105023503 coding downstream 132529 10840566 ~ 11001122 (-)
LOC118937685 NA coding downstream 252261 10879856 ~ 10881390 (-)
LOC110512108 rad21 coding downstream 307639 10811513 ~ 10826012 (-)
LOC118937678 NA coding downstream 371413 10759359 ~ 10762238 (-)
lratd2b LOC106573048 coding upstream 31151 11165113 ~ 11168638 (-)
prelid3a LOC106593866 coding upstream 114075 11196145 ~ 11261793 (-)
LOC110514530 LOC106572903 coding upstream 264130 11398092 ~ 11402862 (-)
LOC110513475 LOC106592216 coding upstream 337977 11471939 ~ 12290710 (-)
LOC118937712 NA coding upstream 450246 11584208 ~ 11585455 (-)
G113660 NA non-coding downstream 721 11132079 ~ 11132930 (-)
G113659 NA non-coding downstream 3125 11130117 ~ 11130526 (-)
G113182 NA non-coding downstream 7330 11125749 ~ 11126321 (-)
G113181 NA non-coding downstream 8425 11124958 ~ 11125226 (-)
G113175 NA non-coding downstream 18727 11114621 ~ 11114924 (-)
G113662 NA non-coding upstream 2571 11136533 ~ 11137690 (-)
G113666 NA non-coding upstream 13988 11147950 ~ 11149850 (-)
G113669 NA non-coding upstream 23555 11157517 ~ 11157750 (-)
G113671 NA non-coding upstream 34985 11168947 ~ 11169149 (-)
G113672 NA non-coding upstream 36179 11170141 ~ 11170720 (-)
G113096 NA other downstream 111917 11021041 ~ 11021734 (-)
eif3h LOC100196680 other downstream 325407 10736729 ~ 10808244 (-)
G112965 NA other downstream 414993 10648265 ~ 10718658 (-)
G112928 NA other downstream 562843 10570442 ~ 10570808 (-)
G112567 NA other downstream 786716 10346471 ~ 10346935 (-)
G113688 NA other upstream 76511 11210473 ~ 11218154 (-)
G113712 NA other upstream 176881 11310843 ~ 11312658 (-)
G113720 NA other upstream 189079 11323041 ~ 11325612 (-)
G113733 LOC106606124 other upstream 215380 11349342 ~ 11352741 (-)

Expression



Co-expression Network