tmem176l.1 (m4a8a)


Basic Information

Item Value
gene id tmem176l.1
gene name m4a8a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 33045832 ~ 33049288 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021559477.2
GATCTCTTTAAAGTGAGGAGGAGGGTCTGTTGGGAACTAGCTGAAACTGGCTGAGCCTTCCCTACCAGCTACTTCCCTGTAAGGAAACCAAACTGCACAACAAGCACTGTGATTGCACAGGACCTGTAGAGGTGTCCATCTCAATTGCAGGAACGGAGCTGTGTAACCAAGAGTGGCCAGCATGTCAGTGACTGTGACCAAAGGTGGAGGGGTGACTGTATTTACAGTGAACTCTAAAGAAGGAAGCAGTTGGCCCCTGCTGTGTCAAATACTTGGGACCTTGTGCTACAGCCCAGCATGCTCTGTGTCCCAGGGACTGAGGAGGCTCCAATCAAGTTCCCAGTCAGCTCTGGGGACTATACAGATCATGGTGGGAGTTCTCAACATTGGCTTGGGAACAATCCTTGTTAGCACTGATTATTCTAGCTTACTGCGATGGAATGGGGTTCCTTATTGGCTTGGTGGTGTGTTTATAGCAGTTGGCATCATGTGTATCTTGGCTGAGAAGTTCCCCAGTCCCTGCTTGGTGGGCATCAATGTGTTGATGAACCTGTCAGGTGCTGCTCTGGCCATTACTGGAATTGTGCTGTATGCTGTAGACCTGGCAAACTACCATTTCTGGTGGATTTGCAATGATGACCACTACAACTGGCGAGATGACTACTATGGTGGCCAGGTGACAAAACCCCCCAGTGATCCGGAGAGGGATATACTCTTGGCGAAATGCAAAGATGCCAAGCAGATTGCACAGATGTTGATGAATGCCTTGGACATTGTGCTCATCGTCCTTGCAGTTCTTCAGCTTTGTGTCACCATAAGCTCTGCGGTGTTGGGTCTCAAGGCTTTGTACAAGAATGGAAAGGAGGGAAAAGAGAACTTCCGGGACCTGGAGCAGTATAAGCCTCTGCTGGAGGAGGTCACCACTAACCCTGCAGCTTAAAGagcactgatctgatctgatataCTTTATTGACCACGTGGGGAAATTTGTCATGGACGATTAAAGAGTGGTGCTGCTTCCACAtggaatacataaataaatagaaTCAAATGTATTCTACATAAATGGATCATCATACAACCCCCTCCACACCCACACATTTGTtgttatacatacagtatgtagtacaTATAGTTCACTTACTTAATGTACTGTAACGCCTACTGTGACTTTGCTTTGTGTAAATGACAACTGACACTGATTGTATGTCTTCATGCTTTTTGTATTTGTCTTTTTTCCAAAACTGAAAGGACAGTTATAAAGGGGACTATATCAAGTTAATTACTGAATTGACTGTTGTATATTAAAAAAAGATATTCTGAA

Function

NR:

description
uncharacterized protein LOC110487571

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021559477.2 True 1324 mRNA 0.45 7 33045832 33049288

Neighbor

gene id symbol gene type direction distance location
LOC110487536 NA coding upstream 111 33028873 ~ 33045721 (+)
LOC110487571 m4a8a coding upstream 11979 33030310 ~ 33033853 (+)
LOC110487479 LOC106605309 coding upstream 43826 32988834 ~ 33002008 (+)
LOC110487447 LOC106605310 coding upstream 106022 32896415 ~ 32939810 (+)
LOC110487411 LOC106605313 coding upstream 163774 32877901 ~ 32882058 (+)
LOC110487588 NA coding downstream 81029 33130317 ~ 33160062 (+)
LOC110487649 LOC106581815 coding downstream 267002 33316290 ~ 33321834 (+)
LOC110487688 LOC106605287 coding downstream 357521 33406809 ~ 33408519 (+)
ntrk1 LOC106605284 coding downstream 385410 33434698 ~ 33460997 (+)
LOC118939517 NA coding downstream 482302 33531590 ~ 33540695 (+)
G133272 NA non-coding upstream 32923 33011062 ~ 33012909 (+)
G133374 NA non-coding upstream 63804 32981182 ~ 32982028 (+)
G133324 NA non-coding upstream 201298 32844251 ~ 32844534 (+)
isg20l2 isg20l2 non-coding upstream 440233 32597101 ~ 32605620 (+)
G133415 NA non-coding downstream 32399 33081687 ~ 33081982 (+)
G133417 NA non-coding downstream 34060 33083348 ~ 33083575 (+)
G133432 LOC106605295 non-coding downstream 53642 33102930 ~ 33135626 (+)
G133439 NA non-coding downstream 95086 33144374 ~ 33173378 (+)
G132342 LOC100136303 other upstream 1158260 31834170 ~ 31887572 (+)
eaf1 LOC106581241 other upstream 1679510 31360408 ~ 31366322 (+)
LOC110534710 LOC106605356 other upstream 1752798 31262054 ~ 31294577 (+)
G131517 ccne2 other upstream 2295878 30748055 ~ 30749954 (+)
G131491 NA other upstream 2345209 30700182 ~ 30700623 (+)
G133473 LOC106605294 other downstream 118150 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 447166 33496454 ~ 33497285 (+)
G133760 LOC106605274 other downstream 764745 33814033 ~ 33814483 (+)
G134735 LOC100136012 other downstream 913129 33962417 ~ 33962658 (+)
si:dkey-30e9.6 LOC106605205 other downstream 1638667 34687955 ~ 34692286 (+)

Expression


Co-expression Network