abtb2b (abtb2)


Basic Information

Item Value
gene id abtb2b
gene name abtb2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46139256 ~ 46289343 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564060.2
ACGTCTGTGCGGCAGTAGTCTGTTTCTGGTGGGGCACTAGGCTCGCTGCAAGCGATGATAGACGATTTCCTTATTTTAAAACCTTCCAAAACCCTTTCCTTTCTCTCAACGGATTTGCAGTTTCTGGTTTCCGTTGATGGACTACCGAATTAACAGATTTTTGCAGGGATTGGAATAATTCGACTACAATTTTGGGAGTCCCGGGGAGAGGGGAGTCCGAGAGAAAAGTTTATATCACTGCGCGACAGGCACTatatggagagaggggggtgagcgtACAGTATGGTTTCATTTTCCATACCATCTATGACTTATGAAAGGATTTAGATATCTTTAAAACATAGACATTACAGAATATACTTCTGATAAATGCCATGTTTAGCGTTACGATCAAATGAACATGTATGGACACGCATGAAAAGAGTTTTGCGTAAACCAGTAGAACCAGATTGCGTGTGAGTGGAGTCGTATACTACAGTCACTCCCAGGTAAACCATTACATTCCCCAAAGTTTCTTCACAACGTCATCCTTGTTATATAAAATACCTATCTAACTATGGCGGGGATGAGCAATGCCCACATGAAGACCCTGGAGGACCTGACTCTAGACTCGGGCTACGGGGCAGGGGACTCCTGCAAGTCCCTGAGCCTCTCGTCCTCCAAGTCCAACTCACAGCCGTTCGTGACGGCTCCGCATCGGGGCAACTGGTGGTACTACTCCGGCTCCATGAACAGTCGCAACAACAGCTGGGACACGGTCAACACGGTGCTGCCCGAGGATCCCGAGGACATCTTCTCCAAGTGTCCCCGTTTACCGGAGCTCGAGGAGTTCCCTTGGACCGAAGACGAGGTGGGAAAGATACTGCGTAAAGTAGCCGGGAACGTTACCGGTGCCAGTGCGTTTCCGGTGCCGACATTATCCAATGAGGCAGTCCGGAGGCTGTCCACGCTCCTTCGTCGAGCCCTCATCCGCATTTCGAGGGAGGCTCAGAGGCTGAGCGTCATGCACTGCCGTTGCACTCGCTTCGAGGTGCAGAGCGCCATGAGGCTGGTGCTGAGCTGGGCTCTGGCCGAACACTGCATATCGGCCACGGTCAAGGCCATCTCCATGTACAGTATGAGCGCCGGAGAGCTCCTGAGGAAGGGCAAATCTGCCCGTTGcggcctctccttctccgtgggaAGGTTCTTTCGATGGATGGTGGACACCCGCATCTCGGTGCGCATCCACGAGTATGCGGCTATCTGTCTTACCGCCTGCATGGAGGCGCTGGTGGAGGAGGCCGGCGCCCGGGTAATGATAGCCGAGCGAGGGCACTCCAGGGTGGACACCGCGTCAGGCTGTGCCCCGGTGTCGGTCGAAGCTCTGGAGGGGGTGGTGAACAATGATGCGGAGCTGTGGGGGGTCCTGCAGCACTATGAGCATCTCATCTGCGGCAAGAACGCCAATGGGGTGCTGTCCCTCCCGGCCCACTTCAGTCCTTACACAGAGGGCCAGGTTCAGCAGGGACAGGGCCAGGCTGgggtggagagcagagaggacgCCTACGCCCAACTGGAGCTCCGCACCCTGGAGCAGTCCCTCCTGGCCACCTGCGTTGGCAGCATCTCCGAGCTCAGTGACCTGGTGTCCAGAGCCATGCACCACATGCAGCGGTTGAGCTCCGTACGCCCGGGGCTCAGCCCGGCCCGCCACACCCGGCCCCAACAGATTGTCTCCTGGTTGCCCGACGCCCTCCACACCCTCTACTACTTCCTCCGCTGCCCACAGATGGAGTCCATGGAGAACCCCAACCTAGACCCACCCAGGATGGCCCTCAGCAAGGAGAGGCCCTTCCTGCTGCTGCCGCCCCTGATGGAGTGGATGCGAGTGGCTATTGTGCACGCTGAGCACCGCCGCAGCCTATTGGTGGACAGCGATGATGTCAGACAGACCGCTAGACAGCTCCTCCCAGGCATGGACTGTGAACCCAGACAGCTGAAGCCTGAGTGTTGTTTTAGTTCTTTCAAGCGTCTGGACTCCAAGGCGGCCACTGATAAGTTTCACTTGGACCTGGGCTTCCGCATGCTCAACTGTGGACGCACCGACCTGATTGGCCAGGCCATCGACCTGCTGGGGCCTGACGGGGTAAACAGCATGGATGACCAGggtatGACCCCTCTAATGTATGCGTGCTCAGCGGGAGATGAAGCTCTGGTCCAGATGTTGATTGATGCCGGGGCCAACCTAGATGTGGCGGTGCCTGCCTGTTCTTCCAAACAACCCTCTGTCCACCCAGACAGTCGCCACTGGGCGGCTCTTACCTTCGCTGTGCTGCACGGTCACATCTCTGTGGTGCAGCTGCTGTTGGATGCAGGGGCTAACGTGGAAGGGGCAGCCGTCCGAAACGGGCAGGAGAGCACAGCAGACACCCCTCTTCAGCTGGCATCTGCAGCAGGGAACTATGAGATGGTGAGCCTGCTCCTCACCAGGGGGGCAGACCCTCTGTCCAAGACCCATGATGGCAATGCTTTGACATCATCACTCTATGAGGACATGAACTGCTTCAGTCACGCCGCAGCGCACGGACACAGGAACGTGTTGCGCAAACTGCTCACCCAGCCCCAGCAGGTCAAAGAGGACGTCCTCTCCCTCGAAGAGATCCTAGCTGAAGGGGTGGAAGGGGAGGACGCCTACCCTCTCCCCAGCCTGCCTCCTCCATCCCCTGGGTGCCCGTCTGAGGGGGGCATCCCACGGCTGTGCAAGGCCAGGATGAAGGCCCTTCAGGAGGCTAGCTACTACAGCGCCGAGCACGGCTACCTGGATGTCACCATGGAGCTACGGGCACTGGGTGTCCCATGGAAGCTGCACGTGTGGCTGGAGTCTCTGCGAGTGGCCCAGCAGCAGTCTAGGGCTTCGGTCACTCTGTCCCTCCTTCGAGAGTTCACCTCCATCAGGGAGGAAGACTACTGCCACGAGCTAGTCTCTCTGGGCCTACCCCTCATGTTCACCATCCTACGAACCACCAAGAACGATGCCATCACCCAGCAGCTTGCAGCCATCTTTAGCCACTGCTTCGGCCCGGCTCCACTACCGGCCATTCCGGAGATGAAGGCCACCCTCTCAGCACAGCTGGACCCCCATTTTCTGAATAACATGGAGATGTCAGATGTGACATTTTTGGTGGAGGGGAAACCTTTCTACGCCCACAAAGTCCTGCTGATCACTGCTTCAGACAGGTTCAAGTCTCTGCTGGCCTCATCAGGACCAGACGGAACTAAAGATATTGAGATCAGTGACGTCAAGTACAACGTCTTCCAGATGATGATGTCATACCTGTACTGCGGAGGGACAGAATCACTGAAGACCAACGTGTCTGACTTGTTGGAGCTGCTTTCAGCAGCCAGCGTCTTTCAGCTGGGGGCCCTACAGAGACACTGTGAGATCATCTGCTCCCAGAGCATCGATCTTGAAAATGCTGTCAGCATCTACAGGACGGCCAAGGCCCACGCTGCTTCAGTGCTGAGTTCGTTCTGCGAGGGCTTCTTCCTGCAGCACATGGCAGGGCTCCTGGAGAGAGAGGCCTTCCGGTCCCTGCTCCTGGGGCCTATGGGGGCCCGCTGGGTGACGGAGATGGGCTCTGGGCCTAAAATGGTGCCTCCTAGGGGAGACTCGCCACTGGAGGAACTCGAGACAACCCTGGCTCGCCGGCTACGCTCTCTCTACATCACCTCCCGTGTCTGACGGGGAAGGGAGAAGGATGGAatgcagaggagaagaggagaaggaggaagagagtgtGCGATCGGTGCACACTCTCTTCCTCCTGGGAGGAGGACGTCTCAAGTGTCCGAGGACATCACGAGTGCCCTTAGATACAGATTTAGGATCAGATTGCCGTCCTGCGATCCTAACCTGAACCATTAGTGGAAAACCACAGAAACTGACCTTAGCTCAGCATCTAAGGGCATCGTCATCCGTAATCATTATTTCTCGGTGGAGGGTAAGACGAGGATGAAAGAGATAAGGCTGGATAGAGAGTGGGTGTGATGGGTACCGTGATGGCCTGTTCCCAAATTTGACTCCTGGACAATTTATTTTGCTACACGGACAATTCAGTGTTTGACCTGAAGTACTCACCTCTAGCTGTCTATTACAGTAGCTATATATACGCAGTGGAAGAGTAGACAGAATGGTCTATCCATCTGTCTTTCTGTTTGTCACAAAGGCTCTGGAAGCTTGTGTACAGAGACGGACAAGACAGCGGAATGAGGCAGTGAGAACTTTAACATTTAGGATTTCTAGAACACTGCTGCCGCCCAGTGGACAAAGCCCGTAAAGGCTTCAGATTATAGAAATAGAGTGACTAGATTATGTTTCTATGCCTCAAATAAAGGTAAAAAGGTTCTGATGGAATATAGAAAGTCTGGAACGTTATTTTAACGGGCCACTGATATGAAGGGGCTGGACTTTTCTCTTTTCCTTCTGCCCCCTTCAGAGTGGTGAAGACTGTGAGAGAAGAGGTGGATTTGAGAGCCCCCACAGTGGATTCAAAGAAGTTGGTTTTACTAAGTGTATTTTCTTTATACATAGTAGTTCTATTTTTTAATTTCTTTTTTTGCCAGAGTGAAGAGGAAAGAAAAACACTAAATGGAATGGACGTTTTCTATTTAAAGAAAAAAAGATGTGAGAGTATTTAACAGGGAGTTCCCTTTTTATTGTGTTTTTATAATTTTaggcaaattattattattattattaatgtaaGATAAAGCTTTGTGTAGCTGGACAATTCCAGGCCTTTTACACACTAAccattacagttgaagtcggaagtttacatacacttagcttggagtcattaaaactcatttttcaactactccacaaatgtcttgttaacaagctatagttttagcaagtcggttaggacatctactttg

Function

symbol description
abtb2 Predicted to enable protein heterodimerization activity. Predicted to act upstream of or within cellular response to toxic substance.

NR:

description
ankyrin repeat and BTB/POZ domain-containing protein 2

GO:

id name namespace
GO:0046982 protein heterodimerization activity molecular_function

KEGG:

id description
K10521 ABTB2; ankyrin repeat and BTB/POZ domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564060.2 True 4923 mRNA 0.53 17 46139256 46289343

Neighbor

gene id symbol gene type direction distance location
ldha ldha coding downstream 647338 45469242 ~ 45491918 (-)
si:ch211-272n13.3 LOC106560721 coding downstream 744288 45278394 ~ 45394968 (-)
LOC118936755 LOC106560723 coding downstream 967400 45171198 ~ 45171856 (-)
LOC110490531 LOC106560723 coding downstream 970996 45134476 ~ 45168260 (-)
LOC110501628 LOC106588271 coding downstream 1014412 45123713 ~ 45124844 (-)
b4galnt4a b4galnt4 coding upstream 29214 46318557 ~ 46756003 (-)
LOC118940396 LOC106604981 coding upstream 300543 46589886 ~ 46592723 (-)
tmem86a tmem86a coding upstream 582952 46844180 ~ 46921608 (-)
si:dkeyp-19e1.3 LOC106560684 coding upstream 743666 47033009 ~ 47130517 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 938023 47227366 ~ 47311705 (-)
G149630 NA non-coding downstream 63003 46046674 ~ 46076253 (-)
G149502 NA non-coding downstream 266494 45821535 ~ 45872762 (-)
G149472 NA non-coding downstream 301266 45777234 ~ 45837990 (-)
G149455 NA non-coding downstream 322270 45750915 ~ 45816986 (-)
G149430 NA non-coding downstream 423259 45715767 ~ 45715997 (-)
G149770 NA non-coding upstream 15748 46305091 ~ 46305320 (-)
G149785 NA non-coding upstream 45925 46335268 ~ 46337890 (-)
G149786 NA non-coding upstream 46125 46335468 ~ 46337721 (-)
G149822 NA non-coding upstream 97594 46386937 ~ 46387270 (-)
G149826 NA non-coding upstream 102112 46391455 ~ 46391726 (-)
G147800 NA other downstream 1275697 44863085 ~ 44863559 (-)
LOC110490449 scmh1 other downstream 1560501 44571948 ~ 44606865 (-)
LOC110490352 NA other downstream 1703139 44434790 ~ 44464449 (-)
LOC110490298 LOC106605170 other downstream 2355537 43776063 ~ 43783884 (-)
G150290 NA other upstream 556809 46846152 ~ 46849616 (-)
G150618 NA other upstream 675391 46964734 ~ 46993665 (-)
G150675 LOC100653436 other upstream 905550 47194893 ~ 47205433 (-)
G151474 NA other upstream 1561442 47850785 ~ 47851348 (-)

Expression


Co-expression Network