G149826



Basic Information


Item Value
gene id G149826
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 46391455 ~ 46391726 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU171706
CAGTAAAAGAGCTcctatgagcccctcctttatagtagaatcctaaaaccagaatctaaagacggtgacatattgtggaagccctaggaagtgcatgcACATCCATAACTAACATGGATTTAAATTGGCACTGTTTTAAAAatcgatttctcacttcctgtttggatttcttctcaggtttttgtcagccatatgagttctgttatactcacagacataattcaaacagtttcagaaacttcagagtgttttctatccaatagtaataataa

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU171706 True 272 lncRNA 0.43 1 46391455 46391726

Neighbor


gene id symbol gene type direction distance location
abtb2b abtb2 coding downstream 102112 46139256 ~ 46289343 (-)
ldha ldha coding downstream 899537 45469242 ~ 45491918 (-)
si:ch211-272n13.3 LOC106560721 coding downstream 996487 45278394 ~ 45394968 (-)
LOC118936755 LOC106560723 coding downstream 1219599 45171198 ~ 45171856 (-)
LOC110490531 LOC106560723 coding downstream 1223195 45134476 ~ 45168260 (-)
LOC118940396 LOC106604981 coding upstream 198160 46589886 ~ 46592723 (-)
tmem86a tmem86a coding upstream 480569 46844180 ~ 46921608 (-)
si:dkeyp-19e1.3 LOC106560684 coding upstream 641283 47033009 ~ 47130517 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 835640 47227366 ~ 47311705 (-)
mrpl23 LOC105008177 coding upstream 1473086 47864812 ~ 47998457 (-)
G149822 NA non-coding downstream 4185 46386937 ~ 46387270 (-)
G149785 NA non-coding downstream 53565 46335268 ~ 46337890 (-)
G149786 NA non-coding downstream 53734 46335468 ~ 46337721 (-)
G149770 NA non-coding downstream 86135 46305091 ~ 46305320 (-)
G149630 NA non-coding downstream 315202 46046674 ~ 46076253 (-)
G149827 NA non-coding upstream 6366 46398092 ~ 46398301 (-)
G149828 NA non-coding upstream 8261 46399987 ~ 46400199 (-)
G149835 NA non-coding upstream 17411 46409137 ~ 46409409 (-)
G149837 NA non-coding upstream 19984 46411710 ~ 46412105 (-)
G149838 NA non-coding upstream 21355 46413081 ~ 46413282 (-)
G147800 NA other downstream 1527896 44863085 ~ 44863559 (-)
LOC110490449 scmh1 other downstream 1812700 44571948 ~ 44606865 (-)
LOC110490352 NA other downstream 1955338 44434790 ~ 44464449 (-)
LOC110490298 LOC106605170 other downstream 2607736 43776063 ~ 43783884 (-)
G150290 NA other upstream 454426 46846152 ~ 46849616 (-)
G150618 NA other upstream 573008 46964734 ~ 46993665 (-)
G150675 LOC100653436 other upstream 803167 47194893 ~ 47205433 (-)
G151474 NA other upstream 1459059 47850785 ~ 47851348 (-)

Expression



Co-expression Network