XLOC_020735


Basic Information

Item Value
gene id XLOC_020735
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2799465 ~ 2807027 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042294
GTAATTGTAGAGTAGAAAAATATGTGAAGCTCGTCCCACAAGCAGTGCAGtgatacggtttctctccagtgtgaatcctcacgTGTGTTTTTAGGACTCCTGAATGACTGAATCTCTTGCCGCAGtatgaacacttgtaaggtttctctccagtgtgagtcctcgtgtgtgttttcaggttttGTGAAGAACCAAATCTCttgttgcagtgtgaacactggtaaggtttctctccagtgtggatcctcatgtgattaTTGAGAATGCTTTTgcagctgaaactctttccacactgagtgcaggtgagaCTATTTACTGCTGTTCCTTTCACTGAAATACTTTCAGTCTCTGATTGGGTTTTTTCTTGATGTTTC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042294 True 374 lncRNA 0.42 2 2799465 2807027

Neighbor

gene id symbol gene type direction distance location
XLOC_020731 NA coding downstream 7975 2702802 ~ 2791490 (-)
XLOC_020733 NA coding downstream 9927 2769742 ~ 2789538 (-)
XLOC_020732 NA coding downstream 15581 2762090 ~ 2783884 (-)
XLOC_020728 NA coding downstream 153455 2569177 ~ 2646010 (-)
XLOC_020729 NA coding downstream 175591 2599019 ~ 2623874 (-)
XLOC_020736 NA coding upstream 7436 2814463 ~ 2828086 (-)
XLOC_020737 aqp12 coding upstream 67811 2874838 ~ 2886937 (-)
XLOC_020738 NA coding upstream 82636 2889663 ~ 2892546 (-)
XLOC_020739 pak2b coding upstream 88484 2895511 ~ 2929156 (-)
XLOC_020740 pigx coding upstream 124313 2931340 ~ 2937529 (-)
XLOC_020747 NA non-coding upstream 540486 3347513 ~ 3347884 (-)
XLOC_020749 NA non-coding upstream 933559 3740586 ~ 3741284 (-)
XLOC_020750 NA non-coding upstream 1076580 3883607 ~ 3886684 (-)

Expression


Co-expression Network