LOC118936890


Basic Information

Item Value
gene id LOC118936890
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100443799 ~ 100457727 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934532.1
ATGGGCAACAATCAACATCAACCCCCAGAACGGGCCTTCTGTGACCTGTCCTCTCCGGGGCAGGAGGGCATCAGGGTGGTCCAGCTCTACCTGATGCCAGCCTTCTTCCTGGGGGTGTTGATACTGGGTCTCCCCCTcaacctgctctctctctggatcttcTTCCAACGCCTGAAACGCTGGtccaggaGTAGTGTCCTGCTCTTCAACCTGGCCATGGCTGACACCCTTTGGCTGCTGGCTCTACCCTTCCTCATTCACTACCACCTAAACGGTCTCCACTGGGGTCTGGGTGTGTCGCTCTGCAAGACCCTTCGGTTGCTCTACCACAACTACTTCTACCTCAGCATCTTCTTCGTTTCCTGCGTTAGCGTGGACCGCTATCTCGCCATCGTCCACCCGCTGCGCTCTGTGGTGTTACTCGGCCGCCGGCAGACCTGTTTCCTCTGTGCCGTTATCTGGGCGATTTCCATGGTGATAAGTGTCCCTGTAGCTCACATGACTTTGCTACAACATTGCCCCGGAGACAATAATCGTACCGTGTGTACCCTGTATATGTTACTGGACGACACTGAGGAGAGCCTACCCTACTCAATCTGCTGTACCACCATCGGCTTCCTCTTCCCTCTAAACTCCATCTGTTACTGTTGCCTCCGCAGCATCAGGGAGCTGCGCCTCCGCAGCCGCcggccacaggtacacctccacaaAAACAAGGGGCGACGTCTCCGTCTGACCCGCGTGTTGACCGCCGTGCTGACCCTCTTTGCCCTGTTCTACCTGCCCTACCACCTAAGCAGGAACGCGGCCATCGTGATGCATGCCATGTACCTGGGCAGGCCGGCGTTCTGGCAGCCCGTTGTGGCCATCTCTTTCCAGGCCCTGGCAGTCGGCTTCAGTGGCTTTGCTATATCAGGCCAGTGA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934532.1 True 924 mRNA 0.57 8 100443799 100457727

Neighbor

gene id symbol gene type direction distance location
LOC110501236 LOC106561804 coding downstream 5749 100372365 ~ 100438050 (-)
LOC118944188 NA coding downstream 91363 100352246 ~ 100352436 (-)
ano3 ano3 coding downstream 102803 100220031 ~ 100340996 (-)
LOC110500995 LOC106561801 coding downstream 281828 100155072 ~ 100161971 (-)
spi1a LOC106592577 coding downstream 317553 100114829 ~ 100126246 (-)
LOC110502607 ano5 coding upstream 3818 100461545 ~ 100543552 (-)
pkp3a pkp3 coding upstream 205245 100662972 ~ 100716213 (-)
LOC110501188 LOC106561812 coding upstream 271463 100729190 ~ 100782512 (-)
sergef sergef coding upstream 405330 100863057 ~ 100889244 (-)
LOC118936896 NA coding upstream 436169 100893896 ~ 100899892 (-)
G211878 NA non-coding downstream 43564 100398680 ~ 100400235 (-)
G211750 NA non-coding downstream 91874 100350480 ~ 100351925 (-)
G211724 NA non-coding downstream 104745 100338816 ~ 100339054 (-)
G211722 NA non-coding downstream 107469 100334235 ~ 100336330 (-)
G211721 NA non-coding downstream 109915 100333505 ~ 100333884 (-)
G211911 NA non-coding upstream 19371 100477098 ~ 100478671 (-)
G211912 NA non-coding upstream 24038 100481765 ~ 100482089 (-)
G211914 NA non-coding upstream 31418 100489145 ~ 100489402 (-)
G211921 NA non-coding upstream 37259 100494986 ~ 100541201 (-)
G211931 NA non-coding upstream 60659 100518386 ~ 100519665 (-)
G211633 NA other downstream 366027 100076683 ~ 100077772 (-)
G211630 LOC106584747 other downstream 370002 100073247 ~ 100073797 (-)
G211447 myo5c other downstream 480325 99959557 ~ 99963474 (-)
G211402 NA other downstream 585944 99856313 ~ 99857855 (-)
LOC110502631 LOC106592148 other upstream 644207 100976119 ~ 101191014 (-)
G212829 LOC106613263 other upstream 1254511 101712238 ~ 101712847 (-)
G212836 NA other upstream 1261640 101719367 ~ 101719732 (-)

Expression


Co-expression Network