G211750


Basic Information

Item Value
gene id G211750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 100350480 ~ 100351925 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU240189
caacgtttatttgtcacgtgcacaggatacagggtgtaaacggtacagtgaagtgTTTACGTGCATCATATatacacattacaatacaatacgcCCGGTCTCGGAAGCTAAGCAAGGTCAGGCCTGGTTAGTCCtaggatgggagactgcctgggaataccaggtgctgtcaGCATTTCTGTCCCTCATGGCACCTGTACTCTTAAACTATTTAAATCAGGGAACAACGGTCTAAACCATTCGGTTTTTTTGGAACAAGGTTGTCAAAACAGCGTCCATAAAACAGAGAGAGCTGTTGCAAAACAGTACATGGATTTTCAAAATGTAGTTGTCTTTTTAAAACGTAAAATGCATTCATCAAAATTATATTATACCGTTCaaattgcaaatacattcatcGAAAGAACACGACTGCTTGCAAAAAAAGATTAACGCGACTATACTTGTCTCTTGAGTCCAAGCAGACAAAACAGAAAGTTAGTTTGTATTTTCAAAATCCGAGTAGATACATACAAACAAATAGTGCTGGTGCATGAACTCTAAAACATTCACGTGGTTCATCAGTAGCTATGGGAAATGTAGTTCTTTTCACACTGATCTACAATAGACAAGTAAACTGAATAGTGCTGGTGCATGAAAACGTCATTTGAATCATCTAGGCCTATTTTGAACATTAAAGGACTTTGTTGCATAAAATCATTTTAGAAGGAAAATGTACTATACAGTAAATAGGTCACAATAATGAGAATATTCCTCAGAAGAAGTAAGCACCATGGTGTTAAAGCTGGCCAAGTTGAAATGgctgagagaaagaaggaggagcgtgaggagagaggacaaagagagaggcaAGATGCCTGGTACAGTTTATAGATGTAGTGTGAGCATATTTCCTCTGAGTGTGTATATTCTATTCATAGCTATGCCAGCCTGTCTGTTCCAAAGCTCCATTGGCTGGCTTGCATATTCTCTTGTATATCTTGGCATTAAGGGAGGCATGTCCTGTGATTCACACTGCCAACATTGGGCAGTAGAATCTTTATTCATTTACCAGTGTCGAAGCCTGGCAAACAATCCCCTCTAAAAAAATAAGCTTGcatttaaaaatatttaaaaaatgtagtagAAGGGCCAACACCCAAAAAAAGCCTTTTCAAGTCAACTGGTACCAACACTCTTCATGTTGTTAGCTGAACCTCAGTCTAGATTGAGACTTCCAGGATCTCTCCATGTCCATCTTTAGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU240189 True 1246 lncRNA 0.39 2 100350480 100351925

Neighbor

gene id symbol gene type direction distance location
ano3 ano3 coding downstream 9484 100220031 ~ 100340996 (-)
LOC110500995 LOC106561801 coding downstream 188509 100155072 ~ 100161971 (-)
spi1a LOC106592577 coding downstream 224234 100114829 ~ 100126246 (-)
LOC110500962 LOC106561782 coding downstream 236535 100103552 ~ 100113945 (-)
LOC110502573 LOC106561753 coding downstream 595590 99726157 ~ 99754890 (-)
LOC118944188 NA coding upstream 321 100352246 ~ 100352436 (-)
LOC110501236 LOC106561804 coding upstream 20440 100372365 ~ 100438050 (-)
LOC118936890 NA coding upstream 91874 100443799 ~ 100457727 (-)
LOC110502607 ano5 coding upstream 109620 100461545 ~ 100543552 (-)
pkp3a pkp3 coding upstream 311047 100662972 ~ 100716213 (-)
G211724 NA non-coding downstream 11426 100338816 ~ 100339054 (-)
G211722 NA non-coding downstream 14150 100334235 ~ 100336330 (-)
G211721 NA non-coding downstream 16596 100333505 ~ 100333884 (-)
G211718 NA non-coding downstream 22151 100328044 ~ 100328329 (-)
G211712 NA non-coding downstream 30689 100319502 ~ 100319791 (-)
G211878 NA non-coding upstream 46755 100398680 ~ 100400235 (-)
G211903 NA non-coding upstream 102698 100454623 ~ 100454842 (-)
G211911 NA non-coding upstream 125173 100477098 ~ 100478671 (-)
G211912 NA non-coding upstream 129840 100481765 ~ 100482089 (-)
G211914 NA non-coding upstream 137220 100489145 ~ 100489402 (-)
G211633 NA other downstream 272708 100076683 ~ 100077772 (-)
G211630 LOC106584747 other downstream 276683 100073247 ~ 100073797 (-)
G211447 myo5c other downstream 387006 99959557 ~ 99963474 (-)
G211402 NA other downstream 492625 99856313 ~ 99857855 (-)
G211904 LOC100136012 other upstream 103224 100455149 ~ 100455433 (-)
LOC110502631 LOC106592148 other upstream 750009 100976119 ~ 101191014 (-)
G212829 LOC106613263 other upstream 1360313 101712238 ~ 101712847 (-)

Expression


Co-expression Network