G104564


Basic Information

Item Value
gene id G104564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 716673 ~ 717468 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117563
AGAAAACCAGTAGGTCTTCATAGACCAGAGCCTCAGAGCCTCCCTACGATTACAGAAGACAACTCATCTCGTTGTTTTATACACTTCTTGTAGGTACATTATAAAACTGTGGTATTGTGCAGTTAAAAAATATAACATTGGAATCTAACGGGGGAAACTGCTTTCAACACTTCAATGTGTTGGGACAACTGCAAGTGTTGAAATCTTAAAGTGTTGAAGTCTTTAGGTGTTGAAGTGTTTAGGTGTTGAAGTTTTAATGTCGGGTAACACTTAAAAGTGTTGAAGTGTTAAAATGTTAATGTTAAGTAACACACAGTGTTGAAGTGTTAAAGTTGGGTAACACTCAAAGTGTTGAAGTCTTAAAGTGTTGAAGTTTTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTTTTAAAGTGTTGAAGTCTTAAAGTTGGGTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTCTTAAAGTGTTGAAGTATTAAAGTGTTGAAGTCTTAAAATGTTGAAGTTTTAAAGTTGGGTAAAGTGTTGAAGTCTTAAAAGTGTTGAAGTTTTATAGTTGGGTAACACTCAAAGTGTTGAAGTCTTAAAGTGTTGAAGTTTTAAAGTGTTGAAGTCTTAAAGTGTTGAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117563 True 683 lncRNA 0.33 2 716673 717468

Neighbor

gene id symbol gene type direction distance location
LOC118937315 NA coding downstream 40161 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 208604 423319 ~ 508560 (-)
LOC118937313 NA coding downstream 233483 476561 ~ 484071 (-)
LOC110516483 LOC106573240 coding upstream 10186 727654 ~ 790871 (-)
eomesb eomesb coding upstream 88682 806150 ~ 813190 (-)
azi2 azi2 coding upstream 162350 879818 ~ 905418 (-)
LOC118937319 NA coding upstream 598196 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 709783 1427251 ~ 1457133 (-)
G104560 NA non-coding downstream 894 715267 ~ 715779 (-)
G104557 NA non-coding downstream 1616 708159 ~ 715057 (-)
G104539 NA non-coding downstream 31470 684926 ~ 685203 (-)
G104535 NA non-coding downstream 35975 680473 ~ 680698 (-)
G104524 NA non-coding downstream 59600 656568 ~ 657073 (-)
G104571 NA non-coding upstream 24657 742125 ~ 743032 (-)
G104588 NA non-coding upstream 68632 786100 ~ 786786 (-)
G104620 NA non-coding upstream 148554 866022 ~ 867915 (-)
G104621 NA non-coding upstream 150285 867753 ~ 868219 (-)
G104603 NA non-coding upstream 153843 871311 ~ 872653 (-)
G105220 NA other upstream 616518 1333986 ~ 1342335 (-)
G105285 NA other upstream 823262 1540730 ~ 1541706 (-)
LOC110515405 LOC106590999 other upstream 876313 1573402 ~ 1683489 (-)
G105340 NA other upstream 923799 1641267 ~ 1641732 (-)
G105427 NA other upstream 1195124 1912592 ~ 1917188 (-)

Expression


Co-expression Network