G104654


Basic Information

Item Value
gene id G104654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 952907 ~ 953167 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117694
taaaccccaggaagagtagctgctgtcttggcaggaactaatggggatccatagtaaaccccaggaagagtagctgctgtcttgacaggaactaatggggatccatagtaaaccccaggaagagtagctgctgccttggcaggaactaatggggatccatagtaaaccccaggaagagtagctgctgccttgacaggaactaatggggatccataataaaccccaggaagagtagctgctgtcttgacaggaactaatggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117694 True 261 lncRNA 0.41 1 952907 953167

Neighbor

gene id symbol gene type direction distance location
LOC110506977 LOC106595099 coding upstream 44331 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 80393 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 226932 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 230514 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 280713 149182 ~ 672194 (+)
LOC118936923 NA coding downstream 15449 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 70294 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 268963 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 356035 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 471149 1424316 ~ 1426453 (+)
G104647 NA non-coding upstream 8437 944266 ~ 944470 (+)
G104640 NA non-coding upstream 18109 934594 ~ 934798 (+)
G104192 NA non-coding upstream 26544 926037 ~ 926363 (+)
G104187 NA non-coding upstream 35267 916680 ~ 917640 (+)
G104186 NA non-coding upstream 37724 914738 ~ 915183 (+)
G104663 NA non-coding downstream 12290 965457 ~ 965657 (+)
G104674 NA non-coding downstream 26252 979419 ~ 979691 (+)
G104676 NA non-coding downstream 28423 981590 ~ 981815 (+)
G104677 NA non-coding downstream 28759 981926 ~ 982173 (+)
G104681 NA non-coding downstream 33095 986262 ~ 986628 (+)
G104092 NA other upstream 251636 690046 ~ 701271 (+)
G103851 NA other upstream 771885 174996 ~ 181022 (+)
G104761 NA other downstream 199894 1153061 ~ 1153749 (+)
G105036 NA other downstream 745906 1699073 ~ 1700431 (+)
G105042 NA other downstream 755802 1708969 ~ 1710557 (+)
G106019 NA other downstream 1567549 2520716 ~ 2527972 (+)

Expression


Co-expression Network