G104676


Basic Information

Item Value
gene id G104676
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 981590 ~ 981815 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117728
atctaactggggatagctagctaacataatgtcacagagcattatctaactggggatagctagctaacataatgtcacagagcattatctaactggggatagctagctaacataatgtcacagagcattatctaactggggatagctagctaacataatgtcacagagcattatctaactggggatagctagctaacataatgtcacagagcattatctaactggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117728 True 226 lncRNA 0.56 1 981590 981815

Neighbor

gene id symbol gene type direction distance location
LOC118936923 NA coding upstream 12062 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 73014 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 109076 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 255615 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 259197 714730 ~ 722393 (+)
rbms3 rbms3 coding downstream 41646 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 240315 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 327387 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 442501 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 474521 1456336 ~ 1564305 (+)
G104674 NA non-coding upstream 1899 979419 ~ 979691 (+)
G104663 NA non-coding upstream 15933 965457 ~ 965657 (+)
G104654 NA non-coding upstream 28423 952907 ~ 953167 (+)
G104647 NA non-coding upstream 37120 944266 ~ 944470 (+)
G104640 NA non-coding upstream 46792 934594 ~ 934798 (+)
G104677 NA non-coding downstream 111 981926 ~ 982173 (+)
G104681 NA non-coding downstream 4447 986262 ~ 986628 (+)
G104684 NA non-coding downstream 10650 992465 ~ 992671 (+)
G104685 NA non-coding downstream 11786 993601 ~ 993900 (+)
G104690 NA non-coding downstream 27064 1008879 ~ 1009114 (+)
G104092 NA other upstream 280319 690046 ~ 701271 (+)
G103851 NA other upstream 800568 174996 ~ 181022 (+)
G104761 NA other downstream 171246 1153061 ~ 1153749 (+)
G105036 NA other downstream 717258 1699073 ~ 1700431 (+)
G105042 NA other downstream 727154 1708969 ~ 1710557 (+)
G106019 NA other downstream 1538901 2520716 ~ 2527972 (+)

Expression


Co-expression Network