G104681


Basic Information

Item Value
gene id G104681
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 986262 ~ 986628 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117733
agacgttccaggagaggatagaattactagaccaattaatggaaggattatgacaaactagccagggatggcccaaaacaacaggtgtaaaaggtgaacgaaaaattaaaaaggaaatggtttcactatgattaccagaaacagtgagggttaaaggtagcgtctcacgctgaatcctggggagaggactaccatccagggcgaacaaggccgtgggctcctttaactgtctgagaggaatgtcatgttcccgagcccaggtctcgtccataaaagagccctccgccccagagtctattaaggcactgcaggaagctgacgaaccggtccagcgtagatggaccgacaaggtagtgcaggatcttga

Function

NR:

description
Pol polyprotein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117733 True 367 lncRNA 0.49 1 986262 986628

Neighbor

gene id symbol gene type direction distance location
LOC118936923 NA coding upstream 16734 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 77686 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 113748 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 260287 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 263869 714730 ~ 722393 (+)
rbms3 rbms3 coding downstream 36833 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 235502 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 322574 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 437688 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 469708 1456336 ~ 1564305 (+)
G104677 NA non-coding upstream 4089 981926 ~ 982173 (+)
G104676 NA non-coding upstream 4447 981590 ~ 981815 (+)
G104674 NA non-coding upstream 6571 979419 ~ 979691 (+)
G104663 NA non-coding upstream 20605 965457 ~ 965657 (+)
G104654 NA non-coding upstream 33095 952907 ~ 953167 (+)
G104684 NA non-coding downstream 5837 992465 ~ 992671 (+)
G104685 NA non-coding downstream 6973 993601 ~ 993900 (+)
G104690 NA non-coding downstream 22251 1008879 ~ 1009114 (+)
G104711 NA non-coding downstream 41003 1027631 ~ 1028148 (+)
G104716 NA non-coding downstream 45416 1032044 ~ 1034766 (+)
G104092 NA other upstream 284991 690046 ~ 701271 (+)
G103851 NA other upstream 805240 174996 ~ 181022 (+)
G104761 NA other downstream 166433 1153061 ~ 1153749 (+)
G105036 NA other downstream 712445 1699073 ~ 1700431 (+)
G105042 NA other downstream 722341 1708969 ~ 1710557 (+)
G106019 NA other downstream 1534088 2520716 ~ 2527972 (+)

Expression


Co-expression Network