G104662



Basic Information


Item Value
gene id G104662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 962906 ~ 965059 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU117702
AACATATTAAACAGTCCTACTGGTCGCCCCCAGTCTAAAACACTGACTCCAGAACATATTAAACAGTCCTACTGGTCGCCCCCAGTCTAAAACACTGACTCCATTCAGACAGAACATATTAAACAGTCCTACTGGTCGCCCCCAGTCTAAAACACTGACTCCATTCAGACAGAACATATTAAACAGCCCTACTGGTCGCCCCCAGTCTAAAACACTGACTCCATTCAGACAGAACATATTAAACAGTCCTACTGGTGGCCCCCAGTCTAAAACACTGACTCCAGTCAGACAGAACATATTAAACAGCCCTACTGCCTGATGTGCATTGATGTCTGAGGGAAAAACA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU117702 True 346 lncRNA 0.51 2 962906 965059

Neighbor


gene id symbol gene type direction distance location
azi2 azi2 coding downstream 57488 879818 ~ 905418 (-)
eomesb eomesb coding downstream 149716 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 172035 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 286394 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 454837 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 350605 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 462192 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 608343 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 737892 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 744457 1709516 ~ 1732333 (-)
G104655 NA non-coding downstream 9022 953674 ~ 953884 (-)
G104644 NA non-coding downstream 24002 938002 ~ 938904 (-)
G104639 NA non-coding downstream 30152 932187 ~ 932754 (-)
G104634 NA non-coding downstream 38559 917291 ~ 924347 (-)
G104633 NA non-coding downstream 46595 915894 ~ 916311 (-)
G104666 LOC100194703 non-coding upstream 2348 967407 ~ 967722 (-)
G104672 NA non-coding upstream 7576 972635 ~ 975873 (-)
G104689 NA non-coding upstream 41193 1006252 ~ 1006927 (-)
G104691 NA non-coding upstream 43822 1008881 ~ 1009116 (-)
G104693 NA non-coding upstream 45119 1010178 ~ 1011679 (-)
G105220 NA other upstream 368927 1333986 ~ 1342335 (-)
G105285 NA other upstream 575671 1540730 ~ 1541706 (-)
G105340 NA other upstream 676208 1641267 ~ 1641732 (-)
G105427 NA other upstream 947533 1912592 ~ 1917188 (-)

Expression



Co-expression Network