G104639



Basic Information


Item Value
gene id G104639
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 932187 ~ 932754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU117678
ctctctctctctctcgctgttgtGTTCAgacaatgtgtctctctctctgttgtgttcagacaatgagtctctctctctctctgttgtgttcagacaatgagtctctctctctgttgtgttcagacaatgagtctctctctctgttgtgttcagacaatgagtctctctctctctgttgtgttcagacaatgagtctctctctctctgttgtgttcagacaatgagtctctctct

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU117678 True 234 lncRNA 0.44 2 932187 932754

Neighbor


gene id symbol gene type direction distance location
azi2 azi2 coding downstream 26769 879818 ~ 905418 (-)
eomesb eomesb coding downstream 118997 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 141316 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 255675 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 424118 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 382910 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 494497 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 640648 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 770197 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 776762 1709516 ~ 1732333 (-)
G104634 NA non-coding downstream 7840 917291 ~ 924347 (-)
G104633 NA non-coding downstream 15876 915894 ~ 916311 (-)
G104632 NA non-coding downstream 17794 914183 ~ 914393 (-)
G104631 NA non-coding downstream 18965 912895 ~ 913222 (-)
G104604 NA non-coding downstream 52534 878797 ~ 879653 (-)
G104644 NA non-coding upstream 5248 938002 ~ 938904 (-)
G104655 NA non-coding upstream 20920 953674 ~ 953884 (-)
G104662 NA non-coding upstream 30152 962906 ~ 965059 (-)
G104666 LOC100194703 non-coding upstream 34653 967407 ~ 967722 (-)
G104672 NA non-coding upstream 39881 972635 ~ 975873 (-)
G105220 NA other upstream 401232 1333986 ~ 1342335 (-)
G105285 NA other upstream 607976 1540730 ~ 1541706 (-)
G105340 NA other upstream 708513 1641267 ~ 1641732 (-)
G105427 NA other upstream 979838 1912592 ~ 1917188 (-)

Expression



Co-expression Network