G104631



Basic Information


Item Value
gene id G104631
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 912895 ~ 913222 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU117667
ttttccaccactactAATCCAATTGCCCAGAGAATAGATttttattggcacccctgttttcaatactccggcACCCTCCCCTTACGGGGATAAAGGTACTGAGACTTATTCTAGAATGTTTTCTGAGATTCTAGAACACATTATGAGGATAAAGGTACTGAGACTTATTCTAGAATGTTTTCTGAGATTCTAGAACACATTGTGAGGATAAAGGTACTGAGACTTATTCTAGAATGTTTTCTGAGATTCTAGAACACATTGTGAGGGAT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU117667 True 269 lncRNA 0.50 2 912895 913222

Neighbor


gene id symbol gene type direction distance location
azi2 azi2 coding downstream 7477 879818 ~ 905418 (-)
eomesb eomesb coding downstream 99705 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 122024 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 236383 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 404826 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 402442 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 514029 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 660180 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 789729 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 796294 1709516 ~ 1732333 (-)
G104604 NA non-coding downstream 33242 878797 ~ 879653 (-)
G104602 NA non-coding downstream 34240 877412 ~ 878655 (-)
G104625 NA non-coding downstream 35977 876632 ~ 876918 (-)
G104603 NA non-coding downstream 40242 871311 ~ 872653 (-)
G104621 NA non-coding downstream 44676 867753 ~ 868219 (-)
G104632 NA non-coding upstream 961 914183 ~ 914393 (-)
G104633 NA non-coding upstream 2672 915894 ~ 916311 (-)
G104634 NA non-coding upstream 4069 917291 ~ 924347 (-)
G104639 NA non-coding upstream 18965 932187 ~ 932754 (-)
G104644 NA non-coding upstream 24780 938002 ~ 938904 (-)
G105220 NA other upstream 420764 1333986 ~ 1342335 (-)
G105285 NA other upstream 627508 1540730 ~ 1541706 (-)
G105340 NA other upstream 728045 1641267 ~ 1641732 (-)
G105427 NA other upstream 999370 1912592 ~ 1917188 (-)

Expression



Co-expression Network