G106277


Basic Information

Item Value
gene id G106277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3067654 ~ 3068028 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120069
ATCTGACAGAGTGAACAGTATTACTGGGAGAAACAGCATCTCTACTGCCCTGATCGCTTTCTCAAGGCAAAAAACCAACTACGACTTCTCCAGGAATACACAGTGAGGGACTGTGGGCTTCTCCAGGAATACACAGTGAGGGACTGTGGGCTTCTCCAGGAATACACAGTGAGGGACTGTGGGCTTCTCCAGGAATACACAATGAGGGACTGTAGGCTTCTCCAGGAATACACAGTGAGGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120069 True 243 lncRNA 0.50 2 3067654 3068028

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 87461 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 89130 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 647033 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 889658 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 947199 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 339159 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 982755 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 997964 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1045094 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1168852 4236880 ~ 4302536 (+)
G106269 NA non-coding upstream 8866 3058148 ~ 3058788 (+)
G106267 NA non-coding upstream 9991 3057011 ~ 3057663 (+)
G106263 NA non-coding upstream 21107 3040256 ~ 3046547 (+)
G106260 NA non-coding upstream 41749 3025133 ~ 3025905 (+)
G106252 NA non-coding upstream 62329 3005064 ~ 3005325 (+)
G106284 NA non-coding downstream 11072 3079100 ~ 3081508 (+)
G106285 NA non-coding downstream 11535 3079563 ~ 3082325 (+)
G106291 NA non-coding downstream 22861 3090889 ~ 3106707 (+)
G106295 NA non-coding downstream 26394 3094422 ~ 3101889 (+)
G106296 NA non-coding downstream 26827 3094855 ~ 3096761 (+)
G106240 NA other upstream 28179 2974823 ~ 3039475 (+)
G106122 NA other upstream 349129 2717961 ~ 2718525 (+)
G106019 NA other upstream 539682 2520716 ~ 2527972 (+)
G105042 NA other upstream 1357097 1708969 ~ 1710557 (+)
G105036 NA other upstream 1367223 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 138769 3006312 ~ 3391033 (+)
G106575 NA other downstream 571406 3639434 ~ 3800352 (+)
G106595 NA other downstream 608237 3676265 ~ 3677850 (+)
G106775 NA other downstream 959047 4027075 ~ 4027594 (+)

Expression


Co-expression Network