G106296


Basic Information

Item Value
gene id G106296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3094855 ~ 3096761 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120096
catctatactgggacaccactactagaggacacacacatcacagtcatctatactgggacaccactactagaggacacacacatcacagtcatctatactgggacaccacgactagaggacacacacatcacagtcatctatactgggaaccactactagaggatacacacatcacagtcatctatactgggacaccacgactagaggacacacacataacaaccatctatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120096 True 233 lncRNA 0.46 2 3094855 3096761

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 114662 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 116331 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 674234 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 916859 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 974400 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 310426 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 954022 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 969231 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1016361 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1140119 4236880 ~ 4302536 (+)
G106285 NA non-coding upstream 12530 3079563 ~ 3082325 (+)
G106284 NA non-coding upstream 13347 3079100 ~ 3081508 (+)
G106277 NA non-coding upstream 26827 3067654 ~ 3068028 (+)
G106269 NA non-coding upstream 36067 3058148 ~ 3058788 (+)
G106267 NA non-coding upstream 37192 3057011 ~ 3057663 (+)
G106301 NA non-coding downstream 16227 3112988 ~ 3113743 (+)
G106305 NA non-coding downstream 24572 3121333 ~ 3122375 (+)
G106309 NA non-coding downstream 27514 3124275 ~ 3167091 (+)
G106322 NA non-coding downstream 48028 3144789 ~ 3197116 (+)
G106325 NA non-coding downstream 50599 3147360 ~ 3148142 (+)
G106240 NA other upstream 55380 2974823 ~ 3039475 (+)
G106122 NA other upstream 376330 2717961 ~ 2718525 (+)
G106019 NA other upstream 566883 2520716 ~ 2527972 (+)
G105042 NA other upstream 1384298 1708969 ~ 1710557 (+)
G105036 NA other upstream 1394424 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 110036 3006312 ~ 3391033 (+)
G106575 NA other downstream 542673 3639434 ~ 3800352 (+)
G106595 NA other downstream 579504 3676265 ~ 3677850 (+)
G106775 NA other downstream 930314 4027075 ~ 4027594 (+)

Expression


Co-expression Network