G106285


Basic Information

Item Value
gene id G106285
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 3079563 ~ 3082325 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU120079
ctgataaatatcacctctacagacgacactgataaatatcacctctacagacgacactgataaatatcacctctacagatGacgctgataaatatcacctctacagacgacactgataaatatcacctctacagacgactctgataaatatcacctctacagacgacactgataaatatcgcctctacagacgactctgataaatatcacctctacagacgacactgataaatatcacctctacagacgacgccTCTACAGAAATCGCCTCTACAGACGacgctgataaatatcacctctacagacgactctgataaatatcacctctacagacgactctgATACAGaaatcacctctacagacgacactgataaatatcacctctacagacgacactgataaatatcgcctctacagacgacactgataaatatcgccTCTACAGACGACTCTGATACAGAAATCGCCTCTACAGACGACTCTGATAAATATCGCCTCTACAGACGACGCTGATACAGAAatcgcctctacagacgacactgataaatatcgccTCTACAGACGACTCTGATACAGAAATCGCCTCTACAGACGACTC

Function

NR:

description
PREDICTED: actin cytoskeleton-regulatory complex protein pan1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU120079 True 599 lncRNA 0.38 2 3079563 3082325

Neighbor

gene id symbol gene type direction distance location
LOC118937337 NA coding upstream 99370 2978786 ~ 2980193 (+)
LOC118937340 NA coding upstream 101039 2978236 ~ 2978524 (+)
LOC118944030 NA coding upstream 658942 2418186 ~ 2420621 (+)
LOC118944029 NA coding upstream 901567 2166121 ~ 2177996 (+)
LOC110516539 NA coding upstream 959108 2116553 ~ 2120455 (+)
mboat1 LOC106573215 coding downstream 324862 3350582 ~ 3487129 (+)
colec10 LOC106591867 coding downstream 968458 4050783 ~ 4065607 (+)
mal2 mal2 coding downstream 983667 4065992 ~ 4085680 (+)
LOC110507036 LOC106594376 coding downstream 1030797 4113122 ~ 4119742 (+)
deptor deptor coding downstream 1154555 4236880 ~ 4302536 (+)
G106277 NA non-coding upstream 11535 3067654 ~ 3068028 (+)
G106269 NA non-coding upstream 20775 3058148 ~ 3058788 (+)
G106267 NA non-coding upstream 21900 3057011 ~ 3057663 (+)
G106263 NA non-coding upstream 33016 3040256 ~ 3046547 (+)
G106260 NA non-coding upstream 53658 3025133 ~ 3025905 (+)
G106291 NA non-coding downstream 8564 3090889 ~ 3106707 (+)
G106295 NA non-coding downstream 12097 3094422 ~ 3101889 (+)
G106296 NA non-coding downstream 12530 3094855 ~ 3096761 (+)
G106301 NA non-coding downstream 30663 3112988 ~ 3113743 (+)
G106305 NA non-coding downstream 39008 3121333 ~ 3122375 (+)
G106240 NA other upstream 40088 2974823 ~ 3039475 (+)
G106122 NA other upstream 361038 2717961 ~ 2718525 (+)
G106019 NA other upstream 551591 2520716 ~ 2527972 (+)
G105042 NA other upstream 1369006 1708969 ~ 1710557 (+)
G105036 NA other upstream 1379132 1699073 ~ 1700431 (+)
G106253 cdkal other downstream 124472 3006312 ~ 3391033 (+)
G106575 NA other downstream 557109 3639434 ~ 3800352 (+)
G106595 NA other downstream 593940 3676265 ~ 3677850 (+)
G106775 NA other downstream 944750 4027075 ~ 4027594 (+)

Expression


Co-expression Network