G108991


Basic Information

Item Value
gene id G108991
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 6556041 ~ 6623583 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU124021
GTCTTTatacaccctttcctctggtcatgTCTTTATACACCCTTTCTTCTGGTCATGTGTCTTTatacaccctttcctctggtcatgTCTTTatacaccctttcctctggtcatgTGTCTTTatacaccctttcctctggtcatgTGTCTTTatacaccctttcctctggtcatgTCTTTatacaccctttcctctggtcatgTCTTTatacaccctttcctctggtcatgTCTTTatacaccctttcctctggtcatgTGTCTTTatacaccctttcctctggtcatGTTTTTATACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU124021 True 300 lncRNA 0.42 2 6556041 6623583

Neighbor

gene id symbol gene type direction distance location
nkd2b LOC106574162 coding upstream 56343 6402676 ~ 6499698 (+)
trip13 LOC106590995 coding upstream 166253 6378373 ~ 6389788 (+)
cep72 LOC106573558 coding upstream 243442 6286558 ~ 6312599 (+)
ccdc12 ccd12 coding upstream 305999 6231369 ~ 6250042 (+)
LOC118937376 NA coding upstream 462101 6092079 ~ 6093940 (+)
LOC110505995 LOC106573077 coding downstream 21633 6645216 ~ 6649794 (+)
ptdss1a LOC106595791 coding downstream 29619 6653202 ~ 6684816 (+)
LOC110505984 LOC106574154 coding downstream 62317 6685900 ~ 6688012 (+)
kif13a kif13a coding downstream 65308 6688891 ~ 6839464 (+)
LOC110506079 NA coding downstream 217449 6841032 ~ 6842093 (+)
G108951 NA non-coding upstream 84066 6464756 ~ 6471975 (+)
G108943 NA non-coding upstream 120036 6434037 ~ 6436005 (+)
G108911 NA non-coding upstream 169321 6386330 ~ 6386720 (+)
G108897 NA non-coding upstream 191252 6362904 ~ 6364789 (+)
G108888 NA non-coding upstream 211518 6334097 ~ 6344523 (+)
G109018 NA non-coding downstream 87 6623670 ~ 6624211 (+)
G109019 NA non-coding downstream 1373 6624956 ~ 6626013 (+)
G109030 NA non-coding downstream 39686 6663269 ~ 6664730 (+)
G109032 NA non-coding downstream 47115 6670698 ~ 6672100 (+)
G108874 LOC106573552 other upstream 270101 6282071 ~ 6285940 (+)
G108805 LOC106594197 other upstream 356700 6151712 ~ 6199341 (+)
G108775 LOC106606109 other upstream 497706 6056996 ~ 6058335 (+)
LOC110505679 LOC106579367 other upstream 553847 5976200 ~ 6002265 (+)
LOC110505637 LOC106573538 other upstream 597228 5953886 ~ 5958813 (+)
G109020 NA other downstream 9495 6633078 ~ 6633913 (+)
rbm24b LOC106596654 other downstream 232503 6855864 ~ 6868976 (+)
malsu1 malsu1 other downstream 284964 6908511 ~ 6911256 (+)
LOC110535156 LOC106606167 other downstream 317933 6941465 ~ 6944043 (+)
G109821 NA other downstream 511664 7135247 ~ 7140979 (+)

Expression


Co-expression Network