G110177


Basic Information

Item Value
gene id G110177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7337746 ~ 7338109 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125573
ggtgtaCTAGACAGACAGGACTGAGTAAGAGCTGGGTAGGAGAGAGGGTGTACTAGACAGACAGGACTGAGTAAGAGCTGGGTAGGAGAGAGGGTGTACTAGACAGACAGGACTGAGTAAGAGCTgggtaggagagagggtgaaccagacagacagtactgagTAAGAGCTGGGTAGGAGAGAGGGTGTACTAGACAGACAGGACTGAGTAAGAGCTgggtaggagagagggtgaaccagacagacagtactgagTAAGAGTTGGGTAGGAGAGAGGGtgtaccagacagacaggactgagTAAGAGCTGGGTAGGAGAGAGGGtgtaccagacagacaggactgagTAACAGCTGGGTAGGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125573 True 364 lncRNA 0.52 1 7337746 7338109

Neighbor

gene id symbol gene type direction distance location
pde11al LOC106573285 coding upstream 33037 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 258669 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 258771 7030625 ~ 7078975 (+)
mpp6a LOC106594438 coding upstream 343031 6944265 ~ 6994715 (+)
LOC110535156 LOC106606167 coding upstream 393703 6941465 ~ 6944043 (+)
cbx3b LOC106573104 coding downstream 20796 7358905 ~ 7369148 (+)
snx10b LOC106593746 coding downstream 31234 7369343 ~ 7377095 (+)
tax1bp1b LOC106594183 coding downstream 158074 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 277801 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 394848 7732957 ~ 7805441 (+)
G110175 NA non-coding upstream 1194 7336344 ~ 7336552 (+)
G110153 NA non-coding upstream 15384 7321979 ~ 7322362 (+)
G110139 NA non-coding upstream 25751 7311629 ~ 7311995 (+)
G109917 NA non-coding upstream 44363 7293040 ~ 7293383 (+)
G109909 NA non-coding upstream 71295 7266035 ~ 7266451 (+)
G110180 NA non-coding downstream 3336 7341445 ~ 7341780 (+)
G110182 NA non-coding downstream 5622 7343731 ~ 7344102 (+)
G110184 NA non-coding downstream 6588 7344697 ~ 7345722 (+)
G110208 NA non-coding downstream 47849 7385958 ~ 7386639 (+)
G110215 NA non-coding downstream 63424 7401533 ~ 7402196 (+)
G109821 NA other upstream 196767 7135247 ~ 7140979 (+)
malsu1 malsu1 other upstream 426541 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 468770 6855864 ~ 6868976 (+)
G110644 NA other downstream 560487 7898596 ~ 7935137 (+)
G110674 NA other downstream 735257 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1698695 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1883376 9221418 ~ 9229025 (+)

Expression


Co-expression Network