G110265


Basic Information

Item Value
gene id G110265
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 7482626 ~ 7484336 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU125684
TATAGTCTCTCTCCTTTTATTAAACAGTAAAACACATACAAATAAGACAGGAACATTCTATCCCTCCCCATGTCAAGAGTAAATAAACCCAACAGGAAGAGAAAAACAAATCAATGAACAGGATCAACACGTGTGACATTGCAGTGAAGTGAGTGGTGACTAGAACTAACAATCATCTGAAGTCCCAGTGGTCTATTGTTGACGAGTGTGGTCGTTAACGAGTATAATGCGGGTCATTTCCTTGACAACGCCTGGGTCTGCTTTCCATGACGACGTGTCCTAAGGTAGCGCTGATATCGTCATGATGATAGCTGTAGTGGTTAGTCAGCCTACTGAGTGACAGTGACTTGAGAGCCTCCCCACACCTCAAACATCCATCTTCTAGCCAAGCCATCGAAAACATTATTAGAAAGCTACTTTAACAAAAGGCAGGATCACAGAGGCAACATGACTCCCATCTTACAGACACAGTGTAGTCTAGTACTCTGCTGAGATGATCTGTCATGTCATCACGGCTGGCTGCGCTCTCTTGGCTTTGACCCAATACACACGTCTTGACAAGTCCtggggagaagggggggggcAAACCGACGCATCCTAACTACATGGTAGTAGTCTTGTATGGAATAGACCCTGCTAAAGCTATGGATGGGGGTTGGGGGTACTGTTCCCCCACCCCTATTGGCCCTcgttctcctcatcctccctcagGAACTGGAAGACAGAGGAGAAGTCTTTGCTGGCGTAGCCCCGAGCACACATCATGCGGTATATCTGGTGGGCCAGGGAGCCCAGAGGGACAGGGGTCTTGGTATTGGTGGCTGTAGTCTGGGCTAGCCCCAGGTCCTGAAGAGGACAAACTCTCATTAGCTCTCTGCCATCACCGCTTGTTGTACACAGCACAGTTAACACATGTCAAACGCACATCTCTTTCCAGTTACATGAAAGTTAATACTATTGACAGAGACATTAACTAAAATAAAGTCACAGGAAATTAAAGAGCCCCTGAAGAATCATCTGTGTCAGTCAAACATTTGTGTACTAAACATCttgcgagagcgagagagcgcgagagagagcgagcgcgcgcgagagagagagagcgcgagagagtgcgcgagagagagagacacaccttgGCCATGAGTTGGGTCCCAAAGCCTCCCTGGTAGTTGTTTCCAGAGGGGACTCCCTCCATGACACCAGGTACAGGGTTGTAGGTGTCACTGGACCAGCAGCGGCCTGAACTCATGTTCAGGATCTTAGCCAGTAGCTTAGGGTCCAGACCTAGTCTGCCAGGGGCCTGATGCCAAGGTTCATGGTCTCAGAGGTCCCGATCATGCCTATCGCCAGCAGCATATTGTTGCAGATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125684 True 1372 lncRNA 0.37 2 7482626 7484336

Neighbor

gene id symbol gene type direction distance location
snx10b LOC106593746 coding upstream 105531 7369343 ~ 7377095 (+)
cbx3b LOC106573104 coding upstream 113478 7358905 ~ 7369148 (+)
pde11al LOC106573285 coding upstream 177917 7282430 ~ 7304709 (+)
LOC110535004 LOC106596209 coding upstream 403549 7067283 ~ 7079077 (+)
LOC110535127 LOC106592104 coding upstream 403651 7030625 ~ 7078975 (+)
tax1bp1b LOC106594183 coding downstream 11847 7496183 ~ 7531274 (+)
creb5b LOC106573409 coding downstream 131574 7615910 ~ 7706660 (+)
chn2 chn2 coding downstream 248621 7732957 ~ 7805441 (+)
plekha8 plekha8 coding downstream 330914 7815250 ~ 7829304 (+)
LOC110514761 LOC106597212 coding downstream 345887 7830223 ~ 7857449 (+)
G110266 NA non-coding upstream 261 7481908 ~ 7482365 (+)
G110237 NA non-coding upstream 36825 7445536 ~ 7445801 (+)
G110231 NA non-coding upstream 41566 7440470 ~ 7441060 (+)
G110233 NA non-coding upstream 43045 7439310 ~ 7439581 (+)
G110228 NA non-coding upstream 49078 7433336 ~ 7433548 (+)
G110269 NA non-coding downstream 905 7485241 ~ 7486293 (+)
G110276 NA non-coding downstream 25123 7509459 ~ 7509924 (+)
G110246 NA non-coding downstream 34902 7519238 ~ 7520196 (+)
G110245 NA non-coding downstream 47427 7531763 ~ 7533820 (+)
G110284 NA non-coding downstream 78824 7563160 ~ 7563695 (+)
G109821 NA other upstream 341647 7135247 ~ 7140979 (+)
LOC110535156 LOC106606167 other upstream 539543 6941465 ~ 6944043 (+)
malsu1 malsu1 other upstream 571421 6908511 ~ 6911256 (+)
rbm24b LOC106596654 other upstream 613650 6855864 ~ 6868976 (+)
G110644 NA other downstream 414260 7898596 ~ 7935137 (+)
G110674 NA other downstream 589030 8073366 ~ 8103920 (+)
LOC110518388 LOC106598833 other downstream 1552468 8820359 ~ 9072449 (+)
LOC110535224 aif1 other downstream 1737149 9221418 ~ 9229025 (+)

Expression


Co-expression Network