G114741


Basic Information

Item Value
gene id G114741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 13151192 ~ 13153857 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU131708
gttttgttgaggatggaggttctttctgtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgaggatggaggttgtttaacatgctgtttcggtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgaggatggaggttgtttctgtcttcgttgtgttgaggatggaggttgtttctgtctttgttgtgctgaggatggaggttgtttaacatgctgtttctgtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgaggatggaggttgtttctgtctttgttgtgttgagggtgGAGGTTGTTTctttctttgttgtgttgaggatggaggttgtttaacatgctgtttcggtctttgttgtgttgaggatggaggttgtttcacatgctgtttctgtctttgttgtgatgaggatggaggctgtttcacatgctgtttctgtctttgttgtgatgaggatggaggctgtttcggtctttgttgtgttgaggatgaggttgtttaacatgctgtttctgtctttgttgtgttgaggatggaggctgtttctgtctttgttgtgatgaggatggaggctgtttctgtctttgttgtgttgaggatggaggttgtttaacatgctgtttctgtctttgttgtgttgaggatggaggttgtttaacatgatgtttctgtctttgttgtgttgaggatggaggttgttttacatgctgtttctgtctttgttgtgatgaggatggaggctgtttcggtctttgttgtgttgaggatggggttgtttaacatgctgtttct

Function

NR:

description
PREDICTED: uncharacterized protein LOC107574092

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU131708 True 904 lncRNA 0.42 2 13151192 13153857

Neighbor

gene id symbol gene type direction distance location
LOC118937728 NA coding downstream 24065 13097545 ~ 13127127 (-)
LOC110507534 LOC106606051 coding downstream 56764 13086169 ~ 13094428 (-)
LOC110507522 LOC106606066 coding downstream 67449 13063090 ~ 13083743 (-)
pabpc1a LOC106593394 coding downstream 216658 12924472 ~ 12934534 (-)
abhd5a LOC106573494 coding upstream 22308 13176165 ~ 13189012 (-)
LOC118937744 NA coding upstream 93099 13246956 ~ 13250244 (-)
LOC110513400 snrk coding upstream 96449 13250306 ~ 13324680 (-)
LOC118937736 NA coding upstream 162902 13316759 ~ 13319153 (-)
LOC110507671 LOC106606048 coding upstream 185708 13339565 ~ 13353635 (-)
G114739 NA non-coding downstream 9961 13140947 ~ 13141231 (-)
G114514 NA non-coding downstream 156945 12993931 ~ 12994247 (-)
G114513 NA non-coding downstream 158602 12992298 ~ 12992590 (-)
G114511 NA non-coding downstream 162563 12988420 ~ 12988629 (-)
G114510 NA non-coding downstream 162941 12987945 ~ 12988251 (-)
G114743 NA non-coding upstream 4734 13158591 ~ 13159374 (-)
G114747 NA non-coding upstream 13884 13167741 ~ 13168196 (-)
G114759 NA non-coding upstream 46963 13200820 ~ 13201048 (-)
G114762 NA non-coding upstream 50288 13204145 ~ 13204557 (-)
G114763 NA non-coding upstream 51633 13205490 ~ 13205707 (-)
G114442 NA other downstream 412035 12735314 ~ 12739157 (-)
G114424 NA other downstream 441877 12707827 ~ 12709315 (-)
G114402 NA other downstream 537512 12610669 ~ 12613680 (-)
G114390 NA other downstream 566052 12584027 ~ 12585140 (-)
G114812 NA other upstream 176891 13330748 ~ 13332506 (-)
LOC110534058 LOC106593045 other upstream 340591 13494448 ~ 13500298 (-)
G114928 LOC106574568 other upstream 420678 13574535 ~ 13582606 (-)
LOC118937748 LOC106574107 other upstream 500045 13650726 ~ 13661631 (-)

Expression


Co-expression Network