G125048


Basic Information

Item Value
gene id G125048
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 24329095 ~ 24329350 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU144461
tttaaagtgttaaccctcgcaaggctgcaggcccagacggcatcccaagccgcgtcctcagagcatgcgcagaccagctggctggtgtgtttacggacatattcaatcaatccttattccagtctgctgttcccacatgcttcaagagggccaccattgttcctgttcccaagaaagctaaggtaactgagctaaacgactaccgccctgtagcactcacttccgtcatcagtgctttgagagactagtcaaggac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU144461 True 256 lncRNA 0.42 1 24329095 24329350

Neighbor

gene id symbol gene type direction distance location
LOC110538767 LOC106605667 coding downstream 75994 24249862 ~ 24253101 (-)
LOC110538717 LOC106578554 coding downstream 144923 24178523 ~ 24184172 (-)
LOC110538705 LOC106577653 coding downstream 156259 24144519 ~ 24172836 (-)
LOC118938710 LOC106605635 coding downstream 189427 24138846 ~ 24139668 (-)
LOC110538681 LOC106605635 coding downstream 197492 24124948 ~ 24131603 (-)
LOC110538859 LOC106578507 coding upstream 150915 24480265 ~ 24492482 (-)
LOC100301652 LOC100301652 coding upstream 174456 24503806 ~ 24504593 (-)
LOC110538887 LOC106605647 coding upstream 202074 24531424 ~ 24540898 (-)
LOC110538978 LOC106605653 coding upstream 255043 24584393 ~ 24601385 (-)
LOC110538828 grik2 coding upstream 533556 24862906 ~ 25110583 (-)
G125047 NA non-coding downstream 337 24328481 ~ 24328758 (-)
G125046 NA non-coding downstream 904 24327983 ~ 24328191 (-)
G125041 NA non-coding downstream 5857 24322964 ~ 24323238 (-)
G125032 NA non-coding downstream 20262 24308378 ~ 24308833 (-)
G125010 NA non-coding downstream 50596 24278259 ~ 24278499 (-)
G125053 NA non-coding upstream 3061 24332411 ~ 24332692 (-)
G125056 NA non-coding upstream 5181 24334531 ~ 24334826 (-)
G125095 NA non-coding upstream 42336 24371686 ~ 24371907 (-)
G125098 NA non-coding upstream 49110 24378460 ~ 24378678 (-)
G125078 NA non-coding upstream 52056 24381406 ~ 24382911 (-)
G125043 NA other downstream 4259 24324580 ~ 24324836 (-)
G125003 NA other downstream 58959 24269226 ~ 24270136 (-)
G124840 NA other downstream 424418 23903839 ~ 23904677 (-)
LOC110538355 LOC106577931 other downstream 1047297 23279116 ~ 23281851 (-)
G125305 NA other upstream 445870 24775220 ~ 24776627 (-)
G127083 NA other upstream 2232264 26561614 ~ 26562127 (-)
LOC110539285 LOC106579350 other upstream 2322026 26641958 ~ 26675649 (-)
LOC110485245 ubr5 other upstream 2941910 27231538 ~ 27278158 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G15702 NA non-coding NC_056701.1 CM032070.1 464845 ~ 511268 (-)
mexican tetra (Astyanax mexicanus) G17285 NA non-coding NC_035899.1 CM008302.1 8001023 ~ 8008808 (+)