Gene
RNA
| Item | Value |
|---|---|
| gene id | G131773 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 31188008 ~ 31188315 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: collagen alpha-2(IX) chain-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU151810 | True | 208 | lncRNA | 0.46 | 2 | 31188008 | 31188315 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486784 | NA | coding | upstream | 41554 | 31136808 ~ 31146454 (+) |
| LOC110534689 | LOC106605368 | coding | upstream | 296622 | 30873733 ~ 30891386 (+) |
| LOC110534679 | LOC106605381 | coding | upstream | 331962 | 30851297 ~ 30856046 (+) |
| plekhf2 | plekhf2 | coding | upstream | 343709 | 30821776 ~ 30844299 (+) |
| LOC110486724 | LOC106581338 | coding | upstream | 380042 | 30798780 ~ 30807966 (+) |
| sri | sorcn | coding | downstream | 11020 | 31199335 ~ 31202392 (+) |
| LOC110486889 | NA | coding | downstream | 20670 | 31208985 ~ 31222079 (+) |
| mxtx2 | NA | coding | downstream | 68202 | 31255824 ~ 31261130 (+) |
| LOC110534710 | LOC106605356 | coding | downstream | 73739 | 31262054 ~ 31294577 (+) |
| LOC110486933 | can7 | coding | downstream | 111687 | 31300002 ~ 31315913 (+) |
| G131731 | LOC100136479 | non-coding | upstream | 12030 | 31106841 ~ 31175978 (+) |
| G131742 | NA | non-coding | upstream | 63364 | 31116142 ~ 31124644 (+) |
| G131721 | NA | non-coding | upstream | 87043 | 31100748 ~ 31100965 (+) |
| G131720 | NA | non-coding | upstream | 88563 | 31099200 ~ 31099445 (+) |
| G131719 | NA | non-coding | upstream | 131722 | 31056060 ~ 31056286 (+) |
| G131777 | NA | non-coding | downstream | 7063 | 31195378 ~ 31195723 (+) |
| G131782 | NA | non-coding | downstream | 19661 | 31207976 ~ 31208235 (+) |
| G131794 | NA | non-coding | downstream | 39858 | 31228173 ~ 31228578 (+) |
| G131813 | NA | non-coding | downstream | 61304 | 31249619 ~ 31249833 (+) |
| G131815 | NA | non-coding | downstream | 63943 | 31252258 ~ 31252469 (+) |
| G131517 | ccne2 | other | upstream | 438054 | 30748055 ~ 30749954 (+) |
| G131491 | NA | other | upstream | 487385 | 30700182 ~ 30700623 (+) |
| G130414 | NA | other | upstream | 1398177 | 29789576 ~ 29789831 (+) |
| LOC110486279 | LOC106605442 | other | upstream | 1494157 | 29685855 ~ 29697686 (+) |
| G130308 | NA | other | upstream | 1546912 | 29600026 ~ 29641096 (+) |
| eaf1 | LOC106581241 | other | downstream | 172121 | 31360408 ~ 31366322 (+) |
| G132342 | LOC100136303 | other | downstream | 669333 | 31834170 ~ 31887572 (+) |
| G133473 | LOC106605294 | other | downstream | 1979123 | 33167438 ~ 33169378 (+) |
| G133663 | LOC106605282 | other | downstream | 2308139 | 33496454 ~ 33497285 (+) |
