G131782


Basic Information

Item Value
gene id G131782
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31207976 ~ 31208235 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151824
attgtcccaagcacaaggtgcacctgtgcaatgatcatgtcgtttaatcagcttcttgatatgccacacttgtcaggtggatggattatctcggcaaatgagaaatgctcactaacagggatttaaacacatttgtgcataacatttgagagaaaagctttttgtgtgtatggaacatttcagggatattttatttcagctcatgaaacatgggatgaacactttacatgttgcatttatacttttgttcagtatatatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151824 True 260 lncRNA 0.45 1 31207976 31208235

Neighbor

gene id symbol gene type direction distance location
sri sorcn coding upstream 5584 31199335 ~ 31202392 (+)
LOC110486784 NA coding upstream 61522 31136808 ~ 31146454 (+)
LOC110534689 LOC106605368 coding upstream 316590 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 351930 30851297 ~ 30856046 (+)
plekhf2 plekhf2 coding upstream 363677 30821776 ~ 30844299 (+)
LOC110486889 NA coding downstream 750 31208985 ~ 31222079 (+)
mxtx2 NA coding downstream 48282 31255824 ~ 31261130 (+)
LOC110534710 LOC106605356 coding downstream 53819 31262054 ~ 31294577 (+)
LOC110486933 can7 coding downstream 91767 31300002 ~ 31315913 (+)
eaf1 LOC106581241 coding downstream 152173 31360408 ~ 31366322 (+)
G131777 NA non-coding upstream 12253 31195378 ~ 31195723 (+)
G131773 NA non-coding upstream 19661 31188008 ~ 31188315 (+)
G131731 LOC100136479 non-coding upstream 31998 31106841 ~ 31175978 (+)
G131742 NA non-coding upstream 83332 31116142 ~ 31124644 (+)
G131721 NA non-coding upstream 107011 31100748 ~ 31100965 (+)
G131794 NA non-coding downstream 19938 31228173 ~ 31228578 (+)
G131813 NA non-coding downstream 41384 31249619 ~ 31249833 (+)
G131815 NA non-coding downstream 44023 31252258 ~ 31252469 (+)
G131517 ccne2 other upstream 458022 30748055 ~ 30749954 (+)
G131491 NA other upstream 507353 30700182 ~ 30700623 (+)
G130414 NA other upstream 1418145 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1514125 29685855 ~ 29697686 (+)
G130308 NA other upstream 1566880 29600026 ~ 29641096 (+)
G132342 LOC100136303 other downstream 649413 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1959203 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2288219 33496454 ~ 33497285 (+)

Expression


Co-expression Network