G131777


Basic Information

Item Value
gene id G131777
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 31195378 ~ 31195723 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU151819
agcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgttaaaagggcagagagcatcatgaagagcaaggaacacaccaggcagtttaaagccggatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatgtaccaagacctggccgtccctc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU151819 True 322 lncRNA 0.40 2 31195378 31195723

Neighbor

gene id symbol gene type direction distance location
LOC110486784 NA coding upstream 48924 31136808 ~ 31146454 (+)
LOC110534689 LOC106605368 coding upstream 303992 30873733 ~ 30891386 (+)
LOC110534679 LOC106605381 coding upstream 339332 30851297 ~ 30856046 (+)
plekhf2 plekhf2 coding upstream 351079 30821776 ~ 30844299 (+)
LOC110486724 LOC106581338 coding upstream 387412 30798780 ~ 30807966 (+)
sri sorcn coding downstream 3612 31199335 ~ 31202392 (+)
LOC110486889 NA coding downstream 13262 31208985 ~ 31222079 (+)
mxtx2 NA coding downstream 60794 31255824 ~ 31261130 (+)
LOC110534710 LOC106605356 coding downstream 66331 31262054 ~ 31294577 (+)
LOC110486933 can7 coding downstream 104279 31300002 ~ 31315913 (+)
G131773 NA non-coding upstream 7063 31188008 ~ 31188315 (+)
G131731 LOC100136479 non-coding upstream 19400 31106841 ~ 31175978 (+)
G131742 NA non-coding upstream 70734 31116142 ~ 31124644 (+)
G131721 NA non-coding upstream 94413 31100748 ~ 31100965 (+)
G131720 NA non-coding upstream 95933 31099200 ~ 31099445 (+)
G131782 NA non-coding downstream 12253 31207976 ~ 31208235 (+)
G131794 NA non-coding downstream 32450 31228173 ~ 31228578 (+)
G131813 NA non-coding downstream 53896 31249619 ~ 31249833 (+)
G131815 NA non-coding downstream 56535 31252258 ~ 31252469 (+)
G131517 ccne2 other upstream 445424 30748055 ~ 30749954 (+)
G131491 NA other upstream 494755 30700182 ~ 30700623 (+)
G130414 NA other upstream 1405547 29789576 ~ 29789831 (+)
LOC110486279 LOC106605442 other upstream 1501527 29685855 ~ 29697686 (+)
G130308 NA other upstream 1554282 29600026 ~ 29641096 (+)
eaf1 LOC106581241 other downstream 164713 31360408 ~ 31366322 (+)
G132342 LOC100136303 other downstream 661925 31834170 ~ 31887572 (+)
G133473 LOC106605294 other downstream 1971715 33167438 ~ 33169378 (+)
G133663 LOC106605282 other downstream 2300731 33496454 ~ 33497285 (+)

Expression


Co-expression Network