XLOC_021147 (C22H1orf53)


Basic Information

Item Value
gene id XLOC_021147
gene name C22H1orf53
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 23264622 ~ 23267893 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041521
AGTTATGGTAACCTTTTATCGCTAGTAGTAGAGTGCGAAAATGATTAGGCAACTTTAACAGCTGTGCTGTATGCAGTGGTTGTGGACTATTTCGAAACGCCAGACTGTCAGAAGTTTGCATTTGTCTGCAAGCAACGTCATGAGACAGGACTTTTTAGTTTCCCTTTTTAGCAGGAGTCATGTTGCTATTTGGTTCAGGCAGACTTTTAAGGCTAACACATTTTCGAACGAATACAATAATGCCAAACGACCTGTTTAATAAGAAAACGGCGCGTTTACATCGCAGTGCATGCGACAGCGAGGTGAATTCGAATTGTGACGATAAAACCATAAGCGCTTCACCTGAAACTATTACAGATGAAGACAGAATCATTCATGAACTCCATCAGGACGCTTGTAAGAATGAGAAAAGGACATATATTGACCCTGTAACCGGATACAATGTGTTCACTGAGTTTGCACACAGAAAACGGGGAAGATGCTGTGGAAGTGCTTGCAGACATTGTCCATACGGGCAAATTAACGTGGAGGATCCTGCTAAGAAGAAAACCTTCAACTCTTTGTTTTATGTATAGCAGTAAATGTGAAGATTGGCTGAACAACTCGTTTTGTGTGCTCCACGTATTGAATTTGGACTTCTTTTAATGCGCATTCGTCTTACGCTGCtctgtttaaaatgatgaaaTACGCTACACCAGATGTGCAACCCACACTC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000071439

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041521 True 715 mRNA 0.41 3 23264622 23267893

Neighbor

gene id symbol gene type direction distance location
XLOC_021146 lhx9 coding downstream 11141 23238790 ~ 23253481 (-)
XLOC_021145 nek7 coding downstream 35953 23105059 ~ 23228669 (-)
XLOC_021144 ptprc coding downstream 196763 22977268 ~ 23067859 (-)
XLOC_021143 BX936380.2 coding downstream 320037 22944461 ~ 22944585 (-)
XLOC_021142 NA coding downstream 403124 22825425 ~ 22861498 (-)
XLOC_021148 crb1 coding upstream 225277 23493170 ~ 23545828 (-)
XLOC_021149 CR388178.3 coding upstream 228922 23496815 ~ 23496929 (-)
XLOC_021150 f13b coding upstream 316904 23584797 ~ 23591493 (-)
XLOC_021151 NA coding upstream 325164 23593057 ~ 23596961 (-)
XLOC_021152 cfhl4 coding upstream 330143 23598036 ~ 23625372 (-)
XLOC_021141 NA non-coding downstream 475894 22770522 ~ 22788728 (-)
XLOC_021139 BX649292.1 non-coding downstream 730159 22533586 ~ 22534463 (-)
XLOC_021137 NA non-coding downstream 741167 22342385 ~ 22523455 (-)
XLOC_021156 BX005398.1 non-coding upstream 484693 23752586 ~ 23754415 (-)
XLOC_021157 BX005398.2 non-coding upstream 490062 23757955 ~ 23758641 (-)
XLOC_021159 AL935303.1 non-coding upstream 701187 23969080 ~ 23969709 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G153215 NA unknown NC_056720.1 CM032089.1 15620649 ~ 15622429 (-)