XLOC_021248 (dre-mir-216b)


Basic Information

Item Value
gene id XLOC_021248
gene name dre-mir-216b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 28780257 ~ 28780333 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00041675
ACTGACTGGGTAATCTCTGCAGGCAACTGTGATGTGATTACAGTCTCACATTGACCTGAAGAGGTTGAGCAGTCTGT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083359

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00041675 True 77 miRNA 0.47 1 28780257 28780333

Neighbor

gene id symbol gene type direction distance location
XLOC_021247 dre-mir-216a coding downstream 220 28779949 ~ 28780037 (-)
XLOC_021246 dre-mir-217 coding downstream 445 28779715 ~ 28779812 (-)
XLOC_021245 si:dkeyp-34c12.1 coding downstream 2698 28739668 ~ 28777559 (-)
XLOC_021244 col8a1b coding downstream 111815 28647130 ~ 28668442 (-)
XLOC_021243 jagn1b coding downstream 134581 28639026 ~ 28645676 (-)
XLOC_021249 NA coding upstream 6979 28787312 ~ 28789599 (-)
XLOC_021250 gtpbp2b coding upstream 77892 28858225 ~ 28871787 (-)
XLOC_021251 NA coding upstream 131545 28911878 ~ 28924270 (-)
XLOC_021252 cbx6a coding upstream 294709 29075042 ~ 29083114 (-)
XLOC_021253 pvalb7 coding upstream 384997 29165330 ~ 29242347 (-)
XLOC_021242 NA non-coding downstream 148320 28628646 ~ 28631937 (-)
XLOC_021234 NA non-coding downstream 1181424 27593983 ~ 27598833 (-)
XLOC_021232 NA non-coding downstream 1216102 27499272 ~ 27564155 (-)
XLOC_021258 NA non-coding upstream 911567 29691900 ~ 29836026 (-)
XLOC_021261 NA non-coding upstream 1472004 30252337 ~ 30272700 (-)
XLOC_021262 NA non-coding upstream 1601966 30382299 ~ 30383228 (-)

Expression


Co-expression Network