| Item | Value |
|---|---|
| gene id | XLOC_021258 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 29691900 ~ 29836026 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0048468 | cell development | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0030154 | cell differentiation | biological_process |
| GO:0048513 | animal organ development | biological_process |
| GO:0009887 | animal organ morphogenesis | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0048568 | embryonic organ development | biological_process |
| GO:0009653 | anatomical structure morphogenesis | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0048598 | embryonic morphogenesis | biological_process |
| GO:0048869 | cellular developmental process | biological_process |
| GO:0048646 | anatomical structure formation involved in morphogenesis | biological_process |
| GO:0007399 | nervous system development | biological_process |
| GO:0061061 | muscle structure development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0007417 | central nervous system development | biological_process |
| GO:0007420 | brain development | biological_process |
| GO:0030903 | notochord development | biological_process |
| GO:0007166 | cell surface receptor signaling pathway | biological_process |
| GO:0060322 | head development | biological_process |
| GO:0009790 | embryo development | biological_process |
| GO:0022626 | cytosolic ribosome | cellular_component |
| GO:0005198 | structural molecule activity | molecular_function |
| ensembl_id | ENSDARG00000092881 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00041693 | False | 3790 | lncRNA | 0.50 | 14 | 29691900 | 29836026 |
| TCONS_00041691 | False | 3638 | processed_transcript | 0.50 | 14 | 29692252 | 29760118 |
| TCONS_00041692 | False | 3129 | processed_transcript | 0.52 | 14 | 29692252 | 29822751 |
| TCONS_00041694 | True | 662 | processed_transcript | 0.53 | 2 | 29744000 | 29759718 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_021257 | pdcd4b | coding | downstream | 1919 | 29655981 ~ 29689981 (-) |
| XLOC_021256 | shoc2 | coding | downstream | 51719 | 29596646 ~ 29640181 (-) |
| XLOC_021255 | adra2a | coding | downstream | 105292 | 29584800 ~ 29586608 (-) |
| XLOC_021254 | pdgfba | coding | downstream | 355591 | 29312228 ~ 29336309 (-) |
| XLOC_021253 | pvalb7 | coding | downstream | 449553 | 29165330 ~ 29242347 (-) |
| XLOC_021259 | smc3 | coding | upstream | 22509 | 29858535 ~ 29906764 (-) |
| XLOC_021260 | dusp5 | coding | upstream | 75300 | 29911326 ~ 29922872 (-) |
| XLOC_021261 | NA | coding | upstream | 416311 | 30252337 ~ 30272700 (-) |
| XLOC_021262 | NA | coding | upstream | 546273 | 30382299 ~ 30383228 (-) |
| XLOC_021263 | BX649448.2 | coding | upstream | 547973 | 30383999 ~ 30384127 (-) |
| XLOC_021251 | NA | non-coding | downstream | 767630 | 28911878 ~ 28924270 (-) |
| XLOC_021249 | NA | non-coding | downstream | 902301 | 28787312 ~ 28789599 (-) |
| XLOC_021248 | dre-mir-216b | non-coding | downstream | 911567 | 28780257 ~ 28780333 (-) |
| XLOC_021247 | dre-mir-216a | non-coding | downstream | 911863 | 28779949 ~ 28780037 (-) |
| XLOC_021246 | dre-mir-217 | non-coding | downstream | 912088 | 28779715 ~ 28779812 (-) |
| XLOC_021265 | NA | non-coding | upstream | 636194 | 30472220 ~ 30557523 (-) |
| XLOC_021266 | BX649490.3 | non-coding | upstream | 644392 | 30480418 ~ 30482315 (-) |