XLOC_021381 (CU929146.3)


Basic Information

Item Value
gene id XLOC_021381
gene name CU929146.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 404975 ~ 406890 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042517
ATGCGGGTGTTGCTGTGCAGTTTTCTGCTCCTGCTGGGAGAGGATGCTCTCCTGGCCTGCTCTCTGAAGAACTATACTCTGTATGTGGAGAAACACGAGTGCGGACACTGCATGGCCATCAACACCACCGTCTGCAGCGGCATGTGCTTCACACGGgaCACAAACGTGCAAGGGTTTGTGGGCAAGCGTTTCCTGCTGCAGCAGAGCTGTATGCACCGCTCTCTGGTGTACCGCTCTGCCAGGATGCCCGGCTGCCCCGTCCACATCGACCCGCTCTTCTTCTACCCAGTGGCCCGGCGCTGCAACTGCACCAAATGCAACACCAGCCGGAACGAGTGTGTGTTCAGacacaagcacaaacacaacAGATGCTCCAAGCAGCTGCGCACCGTCTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000110110

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042517 True 396 mRNA 0.58 2 404975 406890

Neighbor

gene id symbol gene type direction distance location
XLOC_021380 zgc:101663 coding upstream 7675 383782 ~ 397300 (+)
XLOC_021379 ap4b1 coding upstream 37282 354418 ~ 367693 (+)
XLOC_021378 taf11 coding upstream 89538 309063 ~ 315437 (+)
XLOC_021377 PDZD4 coding upstream 155875 216012 ~ 249100 (+)
XLOC_021376 twist3 coding upstream 395636 2669 ~ 9339 (+)
XLOC_021382 slc25a55b coding downstream 2688 409578 ~ 419441 (+)
XLOC_021383 CU929146.1 coding downstream 5652 412542 ~ 412659 (+)
XLOC_021384 CU929146.2 coding downstream 35347 442237 ~ 442352 (+)
XLOC_021385 NA coding downstream 138373 545263 ~ 597603 (+)
XLOC_021386 lsm14b coding downstream 146506 553396 ~ 567183 (+)
XLOC_021393 CABZ01079873.1 non-coding downstream 740272 1147162 ~ 1152058 (+)
XLOC_021396 NA non-coding downstream 1231399 1638289 ~ 1638981 (+)

Expression


Co-expression Network