G195999


Basic Information

Item Value
gene id G195999
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 84793286 ~ 84801094 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU221934
ttgtattcggtcatgtttccggtcaccttgcactgattaaaagcagtggttcgcgctttcagtttcacgcgaatgctgccatcaatccacggtttctggtttgggaatgttttaatcgttgctatgggaacgacatcttcaacgcacgttctaatgaactcgctcaccgaatcagcgtattcgtcaatgttgttgtctgacgcaatacgaaacatatcccagtccacgtgatggaagcagtcttggagcgtggaatcagattggtcggaccagcgttgaacagacctcagcgcgggagcttcttgttttagtttctgtttgtaggcagggagcaacaaaatggagccgtgttcagcttttccgaaaggagagcgggagagggccttatatgcgtcgcggaagttagaatagcaatgatccaaggttttgccagccctggttgcacaatcgatatgctgatacaatttagggagtcttgttttcagattagccttgttaaaatccccagctacaatgaatgcagcctcaggatgtgtgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU221934 True 538 lncRNA 0.47 2 84793286 84801094

Neighbor

gene id symbol gene type direction distance location
LOC110502226 LOC106573176 coding downstream 207879 84556466 ~ 84585407 (-)
tbxas1 LOC106561393 coding downstream 617548 84030716 ~ 84175738 (-)
LOC110497954 LOC106561396 coding downstream 980588 83809205 ~ 83812698 (-)
LOC118942895 NA coding downstream 992689 83798504 ~ 83800597 (-)
LOC110497945 LOC106561398 coding downstream 1001461 83779372 ~ 83791825 (-)
LOC110498041 LOC106561383 coding upstream 257653 85058747 ~ 85102785 (-)
LOC110502232 LOC106561380 coding upstream 669845 85470939 ~ 85487796 (-)
LOC110498116 LOC106561379 coding upstream 737289 85538383 ~ 85545472 (-)
LOC118936851 NA coding upstream 896326 85697420 ~ 85699798 (-)
LOC110502240 nup205 coding upstream 910445 85711539 ~ 85726478 (-)
LOC110498022 LOC106561385 non-coding downstream 192951 84596433 ~ 84910878 (-)
G195734 NA non-coding downstream 373391 84381566 ~ 84419895 (-)
G195739 NA non-coding downstream 404866 84387564 ~ 84388420 (-)
G195615 NA non-coding downstream 497546 84205396 ~ 84295740 (-)
G195569 NA non-coding downstream 695019 84094785 ~ 84098267 (-)
G196029 NA non-coding upstream 49062 84850156 ~ 84850454 (-)
G196274 NA non-coding upstream 248456 85049550 ~ 85056001 (-)
G196275 NA non-coding upstream 249086 85050180 ~ 85061020 (-)
G196310 NA non-coding upstream 306828 85107922 ~ 85108548 (-)
G196325 NA non-coding upstream 316565 85117659 ~ 85117883 (-)
G195486 LOC106573171 other downstream 811119 83977965 ~ 83982167 (-)
G195427 NA other downstream 888835 83881540 ~ 83904451 (-)
G194491 NA other downstream 1177252 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 1570142 83219964 ~ 83223972 (-)
G197498 slc25a18 other upstream 1035205 85831239 ~ 85843493 (-)
G197554 NA other upstream 1158751 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 2101942 86903036 ~ 86903956 (-)
G198912 NA other upstream 2521045 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 4805743 89606837 ~ 89609890 (-)

Expression


Co-expression Network