G197554


Basic Information

Item Value
gene id G197554
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85959845 ~ 85963665 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223618
gtccgactctccttctcatacagaaaaccgtgacagaatcacccaccacaacaggaccaagcggcgtggtaacgggcaacagcagcgAAAGGAGGAAAGGACTTGGGAagaaatagacaggtgggcggtcgacccagagagagtgccggagcccgcctgggattcgatggagcagtgcgcggaaggttatcggagaatggagtttgcgacgcaagcacggcggcgcggacggaggcccgagagtcagccccaaacatttcttggggggggggggggctcagggagagtgtggcagagtcagggttcagaccagagccaactccccctgtttatcgtgaggagccaaggaggagaccagaatcagagccggtgttggaggtgagcgaagcagagactgtgaaggagttaatggggaaattggaggagagagttatgagggagttgctgtgttggtgctttagGTACGATATTCGCCCGatggagcgtgtcggggatttgatggcaccagcgctccatacttgtcctgaggtgcgtgttagtcggctggtgaagattgtgccagcctcacgcactaggcctcctgtgcacctccctagccttgcacgtcctgtgccagccctgctctcaagctCTCCAGTAcaccttcacggtccggtccatcctgtgccacctccacacaccagccctccggtagcagctccccgcaccaggcttcctgtgcgtgttctcggcccagtaccaccagtgccagcaccacgcatcaggcctacagtgcgccttgcctgtccagcgctgtcagagccttcctcctctccagcgctgccggagtctcccgcctatctagctctgtcagagccttcctcctctacagcgctgccggagtctcccgcctgtt

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU223618 True 895 TUCP 0.60 2 85959845 85963665

Neighbor

gene id symbol gene type direction distance location
LOC110498273 LOC106561367 coding downstream 6946 85948772 ~ 85952899 (-)
LOC110498255 LOC106561363 coding downstream 11387 85942497 ~ 85948458 (-)
LOC110498224 LOC106561365 coding downstream 33013 85920854 ~ 85926832 (-)
ribc2 LOC106561368 coding downstream 39261 85915311 ~ 85920584 (-)
LOC110498203 NA coding downstream 115591 85840174 ~ 85844254 (-)
LOC110498321 LOC106561361 coding upstream 48493 86012158 ~ 86017564 (-)
tigara LOC106561357 coding upstream 173026 86134395 ~ 86139827 (-)
ccnd2a LOC106561356 coding upstream 178056 86141721 ~ 86420584 (-)
LOC118936857 NA coding upstream 437704 86401369 ~ 86404155 (-)
setd6 setd6 coding upstream 556357 86520022 ~ 86526770 (-)
G197498 slc25a18 non-coding downstream 123158 85831239 ~ 85843493 (-)
G197441 NA non-coding downstream 205627 85752441 ~ 85754218 (-)
G197424 NA non-coding downstream 214441 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 275319 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 476220 85483027 ~ 85483625 (-)
G197552 LOC106561360 non-coding upstream 63225 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 110608 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 145398 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 146187 86109852 ~ 86110146 (-)
G197638 NA non-coding upstream 146483 86110148 ~ 86110650 (-)
LOC110498022 LOC106561385 other downstream 1320089 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1977678 83977965 ~ 83982167 (-)
G195427 NA other downstream 2055394 83881540 ~ 83904451 (-)
G194491 NA other downstream 2343811 83615566 ~ 83616034 (-)
G198342 LOC100194703 other upstream 939371 86903036 ~ 86903956 (-)
G198912 NA other upstream 1358474 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3643172 89606837 ~ 89609890 (-)
G202279 NA other upstream 4413892 90377557 ~ 90441425 (-)
G203915 rassf9 other upstream 5625547 91589212 ~ 91591049 (-)

Expression


Co-expression Network