G197441


Basic Information

Item Value
gene id G197441
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85752441 ~ 85754218 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU223483
AGGGCCATTTCATAAGACCTTAAAAGTTTATTTACATTGTAAAAAGCAACAAATCACTGATGTTAATAAAACATTGCTGACTTGGCATTGCACTCACTGGTGTCTGCAGCAGTTCTCAATGGCCCAAATTATTGCAAAGTAAAACCTACTTCTCCACAAAAGTTAAACACTGAACGGCAGAAGTGCTACACAAGGAATTAATGGAGTTTTGCATCAAATCCTCCCCGCTTTGATATAAATTAGTCCAACATACTGCGATTCTACGACACTAATGCACAACATAAAACCACCACAGGCTCTTCTAGGTAACTTTTTACCTTGCTGCTCACCAAGTTACATTGAGCCAGTCTAAGAAGTCCCTTGAGTCAGGGGAAAGTCCAAGACTTTGCAGCAAGGAGAATCAGTGTTCTGGTACTTCCAATAAGGCCCAGCATGTGATCACCTTTCACACTCCATACCCTGGGCATCCAAAGCTCATGGACCGGGCAGCATTCCTACCGACCAGCCTCCGCCCAGCTTTGGGCAAAGACCCTGTATTAATGGGATGCTGTAGACTAGGGGGAAAAGCCTGCTGTGGGGACAGTGTTGACAAACGAGCCTCCTGCAGCTCTTTTCCAGCATGGCTGTCCTGAACCTCTCCACATTGAGCTCTCTGCGCAGTTGAGCAGCAAGCTTCCCAGTCCTCTCCTTCCTCAAAACAGGTTGTCTGCATAGCGCTGACGCAGAGGGTCGTTGAGATGGCTCCGGATCCAGCAGAGTCTGACAGATACACAAAGACAGCTTATCCCAAACAGCTGCTAATGTAGCAAAGGCAAGAGATAAACCTTGGAACATTTGTTGATCTAGAATGAAAAGCAAAATCAGTGTGTTGACTTAGCTTTGTGTGGTACTGGTTAATATCTGTCCCTTCCTAAACTGTGAATACCTCTGCACATTTattttgactaggcaagtcaattaagaacaatttcttatttacaatgatggcctacattgatctggtactccctgtacatagctccaTTCTTCTGTATT

Function

NR:

description
PREDICTED: LOW QUALITY PROTEIN: wee1-like protein kinase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU223483 True 1035 lncRNA 0.45 2 85752441 85754218

Neighbor

gene id symbol gene type direction distance location
dennd11 kiaa1147 coding downstream 4042 85734259 ~ 85748399 (-)
LOC110502240 nup205 coding downstream 25963 85711539 ~ 85726478 (-)
LOC118936851 NA coding downstream 52643 85697420 ~ 85699798 (-)
LOC110498116 LOC106561379 coding downstream 206969 85538383 ~ 85545472 (-)
LOC110502232 LOC106561380 coding downstream 264645 85470939 ~ 85487796 (-)
bcl2l13 LOC106561371 coding upstream 11870 85766088 ~ 85802952 (-)
LOC110502245 NA coding upstream 49460 85803678 ~ 85804353 (-)
LOC118936424 slc25a18 coding upstream 81742 85835960 ~ 85838800 (-)
LOC110498203 NA coding upstream 85956 85840174 ~ 85844254 (-)
ribc2 LOC106561368 coding upstream 161093 85915311 ~ 85920584 (-)
G197424 NA non-coding downstream 7037 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 67915 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 268816 85483027 ~ 85483625 (-)
G196784 NA non-coding downstream 300358 85451850 ~ 85452083 (-)
G196757 NA non-coding downstream 318286 85431738 ~ 85434155 (-)
G197498 slc25a18 non-coding upstream 77021 85831239 ~ 85843493 (-)
G197552 LOC106561360 non-coding upstream 272672 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 320055 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 354845 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 355634 86109852 ~ 86110146 (-)
LOC110498022 LOC106561385 other downstream 1112685 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1770274 83977965 ~ 83982167 (-)
G195427 NA other downstream 1847990 83881540 ~ 83904451 (-)
G194491 NA other downstream 2136407 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2529297 83219964 ~ 83223972 (-)
G197554 NA other upstream 205627 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1148818 86903036 ~ 86903956 (-)
G198912 NA other upstream 1567921 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3852619 89606837 ~ 89609890 (-)

Expression


Co-expression Network