LOC110502245


Basic Information

Item Value
gene id LOC110502245
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 85803678 ~ 85804353 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110502245
ATGTAGTGGAAACCTATGAAGATGAACCCCTTGATGTTCAACAAACTGCTTACTAAGCTGGGTGTGTGTGGTAGCTGGCGTTTCATGGACATGTTAGGTCTGGACGAGGAGGATTTGTCGTCTGTACCGATTCCATGCGGCACCGTCATTCTGCGGTTCCTGCTAACGGAACAGCATGAGTTGTTccgggaagaggaaggagagctgGTGTTTGGGGGTCTGACTGTTTTCTTCCTGAGAAACAAAGTGGTCAACTCCTGTGGCACCGTAGCTCTGCTGCACGCATTTGCCGAAAACTCCACCCACATGGTAGTACCATGGTGACTCGCCTGTGAAGAAGTTGGACGAGACATATTGGATGACCCCCCTTAACAAAGCTGCCCACCTAGAGATGAACCAGGCCACCAGAGAGGCCTATTATGACGTGGCAGCACAGGGCCAATGCCGGGTCGAAGCAGATCACGTCAACTTCCATTTAACTACCTTTGTCAAGGTGAACAGAATACTTTATGAGCTGGATCCTAGGATGGAGGGGCCAGTAAACCATGGAGACACCCAGGACAACTCCTTCATCTGGGATGCGGCTCGTGTTTGTCAGGAGTttgtggagagagtggagggggaggtcCACTTCTCTGCTATAGCCTTCTGTTTCTCCAAGAAGGCACACACATAG

Function

NR:

description
ubiquitin carboxyl-terminal hydrolase isozyme L1-like

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110502245 True 676 mRNA 0.51 1 85803678 85804353

Neighbor

gene id symbol gene type direction distance location
bcl2l13 LOC106561371 coding downstream 726 85766088 ~ 85802952 (-)
dennd11 kiaa1147 coding downstream 55279 85734259 ~ 85748399 (-)
LOC110502240 nup205 coding downstream 77200 85711539 ~ 85726478 (-)
LOC118936851 NA coding downstream 103880 85697420 ~ 85699798 (-)
LOC110498116 LOC106561379 coding downstream 258206 85538383 ~ 85545472 (-)
LOC118936424 slc25a18 coding upstream 31607 85835960 ~ 85838800 (-)
LOC110498203 NA coding upstream 35821 85840174 ~ 85844254 (-)
ribc2 LOC106561368 coding upstream 110958 85915311 ~ 85920584 (-)
LOC110498224 LOC106561365 coding upstream 116501 85920854 ~ 85926832 (-)
LOC110498255 LOC106561363 coding upstream 138144 85942497 ~ 85948458 (-)
G197441 NA non-coding downstream 49460 85752441 ~ 85754218 (-)
G197424 NA non-coding downstream 58274 85664173 ~ 85745404 (-)
G197394 NA non-coding downstream 119152 85640538 ~ 85684526 (-)
G197328 NA non-coding downstream 320053 85483027 ~ 85483625 (-)
G196784 NA non-coding downstream 351595 85451850 ~ 85452083 (-)
G197498 slc25a18 non-coding upstream 26886 85831239 ~ 85843493 (-)
G197552 LOC106561360 non-coding upstream 222537 86026890 ~ 86043305 (-)
G197613 NA non-coding upstream 269920 86074273 ~ 86074839 (-)
G197636 LOC106561359 non-coding upstream 304710 86109063 ~ 86109468 (-)
G197637 NA non-coding upstream 305499 86109852 ~ 86110146 (-)
LOC110498022 LOC106561385 other downstream 1163922 84596433 ~ 84910878 (-)
G195486 LOC106573171 other downstream 1821511 83977965 ~ 83982167 (-)
G195427 NA other downstream 1899227 83881540 ~ 83904451 (-)
G194491 NA other downstream 2187644 83615566 ~ 83616034 (-)
LOC110502187 NA other downstream 2580534 83219964 ~ 83223972 (-)
G197554 NA other upstream 155492 85959845 ~ 85963665 (-)
G198342 LOC100194703 other upstream 1098683 86903036 ~ 86903956 (-)
G198912 NA other upstream 1517786 87322139 ~ 87326469 (-)
LOC110499346 vps4a other upstream 3802484 89606837 ~ 89609890 (-)

Expression


Co-expression Network