Gene
RNA
| Item | Value |
|---|---|
| gene id | G197613 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 86074273 ~ 86074839 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU223683 | True | 227 | lncRNA | 0.45 | 2 | 86074273 | 86074839 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498321 | LOC106561361 | coding | downstream | 56709 | 86012158 ~ 86017564 (-) |
| dyrk4 | LOC106561362 | coding | downstream | 100109 | 85955508 ~ 85974164 (-) |
| LOC110498273 | LOC106561367 | coding | downstream | 121374 | 85948772 ~ 85952899 (-) |
| LOC110498255 | LOC106561363 | coding | downstream | 125815 | 85942497 ~ 85948458 (-) |
| LOC110498224 | LOC106561365 | coding | downstream | 147441 | 85920854 ~ 85926832 (-) |
| tigara | LOC106561357 | coding | upstream | 61852 | 86134395 ~ 86139827 (-) |
| ccnd2a | LOC106561356 | coding | upstream | 66882 | 86141721 ~ 86420584 (-) |
| LOC118936857 | NA | coding | upstream | 326530 | 86401369 ~ 86404155 (-) |
| setd6 | setd6 | coding | upstream | 445183 | 86520022 ~ 86526770 (-) |
| LOC110498617 | LOC106561447 | coding | upstream | 583175 | 86658014 ~ 86676250 (-) |
| G197552 | LOC106561360 | non-coding | downstream | 30968 | 86026890 ~ 86043305 (-) |
| G197498 | slc25a18 | non-coding | downstream | 237586 | 85831239 ~ 85843493 (-) |
| G197441 | NA | non-coding | downstream | 320055 | 85752441 ~ 85754218 (-) |
| G197424 | NA | non-coding | downstream | 328869 | 85664173 ~ 85745404 (-) |
| G197394 | NA | non-coding | downstream | 389747 | 85640538 ~ 85684526 (-) |
| G197636 | LOC106561359 | non-coding | upstream | 34224 | 86109063 ~ 86109468 (-) |
| G197637 | NA | non-coding | upstream | 35013 | 86109852 ~ 86110146 (-) |
| G197638 | NA | non-coding | upstream | 35309 | 86110148 ~ 86110650 (-) |
| G197639 | NA | non-coding | upstream | 36034 | 86110873 ~ 86111077 (-) |
| G197645 | NA | non-coding | upstream | 45649 | 86120488 ~ 86124270 (-) |
| G197554 | NA | other | downstream | 110608 | 85959845 ~ 85963665 (-) |
| LOC110498022 | LOC106561385 | other | downstream | 1434517 | 84596433 ~ 84910878 (-) |
| G195486 | LOC106573171 | other | downstream | 2092106 | 83977965 ~ 83982167 (-) |
| G195427 | NA | other | downstream | 2169822 | 83881540 ~ 83904451 (-) |
| G198342 | LOC100194703 | other | upstream | 828197 | 86903036 ~ 86903956 (-) |
| G198912 | NA | other | upstream | 1247300 | 87322139 ~ 87326469 (-) |
| LOC110499346 | vps4a | other | upstream | 3531998 | 89606837 ~ 89609890 (-) |
| G202279 | NA | other | upstream | 4302718 | 90377557 ~ 90441425 (-) |
| G203915 | rassf9 | other | upstream | 5514373 | 91589212 ~ 91591049 (-) |
