G205523


Basic Information

Item Value
gene id G205523
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93476730 ~ 93477442 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU232610
atcacaaagccctggcctcaatcccattgaaaatctgtgggcagaattgaaaaagcgtgtgcgagcaaggaggcctacaaacctgacttggttacaccagctctatctggaggaatgggacaaaattcacccaatttattgtgggaagcttgtggaagacttcccaaaacgtttgacccaagttaaaccatttaaaggcaatgctaccaaaaacgaattgagtgtatgtaaacttcttacccactaaaacttcttacccactaaaagattaaataaataattgtctctactattattctggcatttcacattcttaaaataaagtggtcatcctaactgacctaagatagggaatttttactaggattaaatgtcaggaattgtgaaaaacggagtttaaatgtatttgcctaaggtgtatgtaaacttctgacttcaactaagTATCTTTGCCATTATAGATGAATAGGGTAAATGTTTAATTGTATTTGCTGACACCCAACCCACTGATATGTTGTCACTAGTAGAGTAGCTATCTAACTATAAAAACCATGCCCTTCTGCAAACACACCTTCTCCAATGTTGGTTACAAGGCGGCacttatttaaattaggtaaTAGAATATAatgttaccattggtgtattaaaatgagagAGTTAGAGTGATGTCACCCTATCCCCTTAATAATCCCACCTCCTGAATCCAAGTTttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU232610 True 713 lncRNA 0.62 1 93476730 93477442

Neighbor

gene id symbol gene type direction distance location
LOC110502396 LOC105018284 coding upstream 99825 93373307 ~ 93376905 (+)
LOC110499974 LOC106561627 coding upstream 141212 93270955 ~ 93335518 (+)
ric8a ric8a coding upstream 391845 93068836 ~ 93084885 (+)
trnap-agg-6 NA coding upstream 409345 93067314 ~ 93067385 (+)
trnap-ugg-6 NA coding upstream 412421 93064238 ~ 93064309 (+)
LOC118936880 NA coding downstream 145591 93623033 ~ 93624085 (+)
LOC118936881 NA coding downstream 238647 93716089 ~ 93721762 (+)
LOC110500011 LOC106561648 coding downstream 668221 94145663 ~ 94149467 (+)
dnm1l LOC106561645 coding downstream 672989 94150431 ~ 94172796 (+)
LOC110500081 NA coding downstream 786567 94264009 ~ 94268751 (+)
G205520 NA non-coding upstream 4906 93471622 ~ 93471824 (+)
G205506 NA non-coding upstream 26125 93450179 ~ 93450605 (+)
G205486 NA non-coding upstream 67032 93409100 ~ 93409698 (+)
G205404 NA non-coding upstream 88180 93371393 ~ 93388550 (+)
G205405 NA non-coding upstream 139016 93337154 ~ 93337714 (+)
G205525 NA non-coding downstream 3512 93480954 ~ 93481155 (+)
G205533 NA non-coding downstream 14481 93491923 ~ 93492126 (+)
G205536 NA non-coding downstream 18271 93495713 ~ 93496054 (+)
G205542 NA non-coding downstream 27598 93505040 ~ 93505270 (+)
G205561 NA non-coding downstream 60739 93538181 ~ 93576687 (+)
G205482 NA other upstream 74496 93401617 ~ 93402234 (+)
LOC110499942 LOC106561637 other upstream 638603 92837196 ~ 92839440 (+)
G204593 NA other upstream 794375 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 1316827 92157275 ~ 92159903 (+)
G205683 LOC106573085 other downstream 318640 93796082 ~ 93798936 (+)
G205688 NA other downstream 332918 93810360 ~ 93812169 (+)
G206285 NA other downstream 463044 93940486 ~ 93941471 (+)
G206389 LOC106561642 other downstream 623537 94100979 ~ 94101872 (+)
LOC110500139 LOC106561672 other downstream 925149 94391364 ~ 94437682 (+)

Expression


Co-expression Network