G213485


Basic Information

Item Value
gene id G213485
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102334777 ~ 102335088 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242487
gttgaacatctttatttaaccaggtaggccagctgagaacatctttatttaagtaggccagttgagaacatctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacatctttatttaaccaggtaggccagttgaacatctttatttaaccaggtaggccagttgagaacatctttatttaaccaggtaggccagttgagaacaagttctcatttacaactgtgacctggcaaagataaagcaaagcagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242487 True 279 lncRNA 0.39 2 102334777 102335088

Neighbor

gene id symbol gene type direction distance location
commd4 comd4 coding downstream 42421 102287895 ~ 102292356 (-)
LOC110501416 LOC106561859 coding downstream 334690 101997799 ~ 102000087 (-)
LOC110501407 LOC106561868 coding downstream 418334 101912984 ~ 101916443 (-)
LOC110517830 LOC105018063 coding downstream 588230 101743015 ~ 101746551 (-)
LOC118944015 NA coding downstream 628130 101706005 ~ 101706647 (-)
LOC110501505 LOC106561846 coding upstream 90969 102426057 ~ 102444259 (-)
hexa hexa coding upstream 173404 102508492 ~ 102560986 (-)
c2h15orf39 LOC106561847 coding upstream 240211 102575299 ~ 102614406 (-)
trnaq-cug NA coding upstream 400192 102735280 ~ 102735351 (-)
LOC110501471 rl4a coding upstream 436057 102771145 ~ 102777929 (-)
G213465 NA non-coding downstream 53088 102280221 ~ 102281689 (-)
G213425 NA non-coding downstream 147819 102185943 ~ 102186958 (-)
G213418 NA non-coding downstream 153528 102181032 ~ 102181249 (-)
G213411 NA non-coding downstream 163833 102170185 ~ 102170944 (-)
G213410 NA non-coding downstream 165857 102168621 ~ 102168920 (-)
G213495 NA non-coding upstream 23103 102358191 ~ 102358910 (-)
G213507 NA non-coding upstream 46557 102381645 ~ 102383966 (-)
G213475 NA non-coding upstream 51041 102386129 ~ 102531578 (-)
G213533 NA non-coding upstream 113845 102448933 ~ 102465195 (-)
G213536 NA non-coding upstream 117118 102452206 ~ 102498747 (-)
G212836 NA other downstream 615045 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 621930 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 1155016 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 1620524 100662972 ~ 100716213 (-)
G214030 NA other upstream 484280 102819368 ~ 102819829 (-)
G214038 NA other upstream 508933 102844021 ~ 102847527 (-)
G214041 NA other upstream 528319 102863407 ~ 102863771 (-)
G214126 NA other upstream 786561 103121649 ~ 103122969 (-)

Expression


Co-expression Network