hexa (hexa)


Basic Information

Item Value
gene id hexa
gene name hexa
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102508492 ~ 102560986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036961273.1
TATTCTGAAATGGAATAGATGATCAAACTATACAACTACCTAGCCAGAGAGGGGTAACGTTACCTGACAGGAgcgctagctagctacgttagcttGCTAGGTACATTCATAGTTTTTAGTATGGCTGTTTTTAAGCTCAACTTCAACATTTCCACCAAGGACGTTGCCTCTCAGATCGTCATTCTCCCTTTCTTGGGCAAGGAACATTTTAGAGTAGACTTGGATCTGACGAGGTAAAAACGTAATTTAAGTGCTGGGTGTTTTAGGACTGTTTACTTTGCGTTTGGACCGGAACCCGAAAGTGGGATTCACACCTGATCACGTGATTTGTTTGAGTCTAAAGCGTCTGCCTGTATCACGTGACTCTTTTCCAGTTCAGTCTTCCTCCTTTGAACGCCAGGACCGTCCAGGACAGTACAGCACACTGTACATCCGCAAGAACACCAATTTGACATTCTAGACTCACGTGATACAATGGAAGAGAAAACTATCTCCAACTCCAGGCGTTGTTATAAACAATGGCTTTGGTTCATGGTTTTGTTCATGTCCTTCTCTGTAATCTACGTGGATGCGGTGTGGCCGATGCCTCAAATGATCAGCTCTTCCATGGCCCGATACACACTAAATCCACGGGAGTTTATTTTTCAGTACTCTAGTGGATCATCCGCTCAACCCGGTTGTTCTCTTCTGGACTCGGCTTTCGAGAGATACTTCCCGCTCATCTTCACGGATTATAGGGCAGCCAGACCCAGACAGCACGATGAATGGTTTAGGTTCCCTTTCACCGTTGTGGTCCATGTGGAGAGAGCAGAATGTGAGGGCTATCCAGACGCAGACTCCTCAGAAAGCTACAAGCTGAGTGTGTGTTCGGGCCAGGCAGCACTGAGGGCTGAGACGGTATGGGGAGCACTCAGAGGTTTGGAGTCATTCAGTCAGCTGGTCTACCAAGATGACTTTGGGGAGTATTTTGTGAATGAGACTAAGATAGAAGACTTTCCCCGCTTCCAGTTCCGAGGGATATTATTGGATACGTCACGTCATTACCTTCCTTTACACGCTATTCTGAAGACCCTGGATGCGATGTCCTACAACAAGTTCAATGTGTTCCACTGGCACATCGTGGACGACCCCTCCTTCCCCTACCAGAGTAGCACCTTCCCTGACCTCAGCAgcaagGGGGCGTTCCATCCGTCGACCCATGTGTACACCCAGATAGACGTGAAGAGGGTTATCGCCCACGCCAGACTCAGAGGCATTAGGGTCCTGGCTGAATTTGACTCCCCGGGACACACCCAGTCATGGGGCAAAGGACAGCCCGGTCTCCTGACCCCCTGCTATAAGGGCACAGTTCCCTCTGGGACGTTCGGTCCAGTGAACCCAGCCAACTCCTCCAGCTACCAGTTCATGACCCGCCTGTTTAAAGAGGTCACCTCAGTGTTTCCTGACTCTTACGTCCATCTGGGAGGGGACGAGGTAGACTTCACCTGCTGGAAGTCCAACCCTGATGTCCGAGGCTTCATGCTGAAGATGGGGTTTGGAACTGACTACACAAAACTGGAATCCTACTACATGGAAAATATGGTGAACATTACTAAGGGACTCAACAAGACAGCCATAGTCTGGCAGGACGTGTTTGACTACCATGAAAAAATCCCAGTGGACACGGTGCTCCACATCTGGAAGGGGAGCCCTGGTCAGATACAACAGGAGTTGAGTAGCATCACCCTGGCTGGGTACAGGGTCATACTGGCTGCCCCCTGGTACATCAACCACATCGACTACGGACAGGACTGGGAaaaatactacaccatacagccACTCAACTTCACTGGTACAGAGCAGCAGAAGAAACTGGTGATTGGTGGAGAGGTGTGCATGTGGGGAGAGTATGTTGATGCTACCaacctctctcctcgtctctggccgaGGGCGAGTGCTGCTGGAGAGCGATTGTGGAGTGATGAGAGGATGACCTCCAGTGTGATCGACGCCTTCCCTCGCCTCGTGGACTTCCGCTGCAGGCTACTGAGgcgcGGTATCCAGGCAGAGCCTCTGTTTGTGGGTCACTGCAGACATGAGTATCAGGGTATCTGAAACATGGCTGGTTGTGTGTCACCAGTCAGGGCTTTAAATGAACGTTTCTTCATTGGTACCACAGAAAGTAAAGAGCACAAGACAGAATTTTGGGAGCaccagattatatatattttttttactgtggTAATGAATAACAGTTTTGCAGTTGTATTTTTAAATATAATAAGGGTTGTTTTTAATCACCTGTATAATTATGTTTGCTGTTGCAATTTTGAATACAATCAATGTTCTGTTTATCACATTTGTTTGTCCAAAACAAATTACCTATATAAATACTGTATGTTTGCCGTTGCACTTTCGAATACAATTATTAAaagttgtttttattttaat
>XM_036961277.1
TTGGGTATATTCTGAAATGGAATAGATGATCAAACTATACAACTACCTAGCCAGAGAGGGGTAACGTTACCTGACAGGAgcgctagctagctacgttagcttGCTAGGTACATTCATAGTTTTTAGTATGGCTGTTTTTAAGCTCAACTTCAACATTTCCACCAAGGACGTTGCCTCTCAGATCGTCATTCTCCCTTTCTTGGGCAAGGAACATTTTAGAGTAGACTTGGATCTGACGAGGTAAAAACGTAATTTAAGTGCTGGGTGTTTTAGGACTGTTTACTTTGCGTTTGGACCGGAACCCGAAAGTGGGATTCACACCTGATCACGTGATTTGTTTGAGTCTAAAGCGTCTGCCTGTATCACGTGACTCTTTTCCAGTTCAGTCTTCCTCCTTTGAACGCCAGGACCGTCCAGGACAGTACAGCACACTGTACATCCGCAAGAACACCAATTTGACATTCTAGACTCACGTGATACAATGGAAGAGAAAACTATCTCCAACTCCAGGCGTTGTTATAAACAATGGCTTTGGTTCATGGTTTTGTTCATGTCCTTCTCTGTAATCTACGTGGATGCGGTGTGGCCGATGCCTCAAATGATCAGCTCTTCCATGGCCCGATACACACTAAATCCACGGGAGTTTATTTTTCAGTACTCTAGTGGATCATCCGCTCAACCCGGTTGTTCTCTTCTGGACTCGGCTTTCGAGAGATACTTCCCGCTCATCTTCACGGATTATAGGGCAGCCAGACCCAGACAGCACGATGAATGGTTTAGGTTCCCTTTCACCGTTGTGGTCCATGTGGAGAGAGCAGAATGTGAGGGCTATCCAGACGCAGACTCCTCAGAAAGCTACAAGCTGAGTGTGTGTTCGGGCCAGGCAGCACTGAGGGCTGAGACGGTATGGGGAGCACTCAGAGGTTTGGAGTCATTCAGTCAGCTGGTCTACCAAGATGACTTTGGGGAGGGGGCGTTCCATCCGTCGACCCATGTGTACACCCAGATAGACGTGAAGAGGGTTATCGCCCACGCCAGACTCAGAGGCATTAGGGTCCTGGCTGAATTTGACTCCCCGGGACACACCCAGTCATGGGGCAAAGGACAGCCCGGTCTCCTGACCCCCTGCTATAAGGGCACAGTTCCCTCTGGGACGTTCGGTCCAGTGAACCCAGCCAACTCCTCCAGCTACCAGTTCATGACCCGCCTGTTTAAAGAGGTCACCTCAGTGTTTCCTGACTCTTACGTCCATCTGGGAGGGGACGAGGTAGACTTCACCTGCTGGAAGTCCAACCCTGATGTCCGAGGCTTCATGCTGAAGATGGGGTTTGGAACTGACTACACAAAACTGGAATCCTACTACATGGAAAATATGGTGAACATTACTAAGGGACTCAACAAGACAGCCATAGTCTGGCAGGACGTGTTTGACTACCATGAAAAAATCCCAGTGGACACGGTGCTCCACATCTGGAAGGGGAGCCCTGGTCAGATACAACAGGAGTTGAGTAGCATCACCCTGGCTGGGTACAGGGTCATACTGGCTGCCCCCTGGTACATCAACCACATCGACTACGGACAGGACTGGGAaaaatactacaccatacagccACTCAACTTCACTGGTACAGAGCAGCAGAAGAAACTGGTGATTGGTGGAGAGGTGTGCATGTGGGGAGAGTATGTTGATGCTACCaacctctctcctcgtctctggccgaGGGCGAGTGCTGCTGGAGAGCGATTGTGGAGTGATGAGAGGATGACCTCCAGTGTGATCGACGCCTTCCCTCGCCTCGTGGACTTCCGCTGCAGGCTACTGAGgcgcGGTATCCAGGCAGAGCCTCTGTTTGTGGGTCACTGCAGACATGAGTATCAGGGTATCTGAAACATGGCTGGTTGTGTGTCACCAGTCAGGGCTTTAAATGAACGTTTCTTCATTGGTACCACAGAAAGTAAAGAGCACAAGACAGAATTTTGGGAGCaccagattatatatattttttttactgtggTAATGAATAACAGTTTTGCAGTTGTATTTTTAAATATAATAAGGGTTGTTTTTAATCACCTGTATAATTATGTTTGCTGTTGCAATTTTGAATACAATCAATGTTCTGTTTATCACATTTGTTTGTCCAAAACAAATTACCTATATAAATACTGTATGTTTGCCGTTGCACTTTCGAATACAATTATTAAaagttgtttttattttaat

Function

symbol description
hexa Predicted to enable N-acetyl-beta-D-galactosaminidase activity and beta-N-acetylhexosaminidase activity. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be located in lysosome. Is expressed in several structures, including axis; lens placode; optic vesicle; polster; and visual system. Human ortholog(s) of this gene implicated in Tay-Sachs disease. Orthologous to human HEXA (hexosaminidase subunit alpha).

NR:

description
beta-hexosaminidase subunit alpha-like

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0004563 beta-N-acetylhexosaminidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036961273.1 False 2430 mRNA 0.48 14 102508492 102560979
XM_036961277.1 True 2224 mRNA 0.48 12 102508492 102560986

Neighbor

gene id symbol gene type direction distance location
LOC110501505 LOC106561846 coding downstream 64233 102426057 ~ 102444259 (-)
commd4 comd4 coding downstream 216136 102287895 ~ 102292356 (-)
LOC110501416 LOC106561859 coding downstream 508405 101997799 ~ 102000087 (-)
LOC110501407 LOC106561868 coding downstream 592049 101912984 ~ 101916443 (-)
LOC110517830 LOC105018063 coding downstream 761945 101743015 ~ 101746551 (-)
c2h15orf39 LOC106561847 coding upstream 14313 102575299 ~ 102614406 (-)
trnaq-cug NA coding upstream 174294 102735280 ~ 102735351 (-)
LOC110501471 rl4a coding upstream 210159 102771145 ~ 102777929 (-)
LOC118944154 NA coding upstream 211212 102772198 ~ 102772265 (-)
LOC118944156 NA coding upstream 211565 102772551 ~ 102772618 (-)
G213536 NA non-coding downstream 9745 102452206 ~ 102498747 (-)
G213533 NA non-coding downstream 43297 102448933 ~ 102465195 (-)
G213507 NA non-coding downstream 124526 102381645 ~ 102383966 (-)
G213495 NA non-coding downstream 149582 102358191 ~ 102358910 (-)
G213485 NA non-coding downstream 173404 102334777 ~ 102335088 (-)
G213634 LOC106604990 non-coding upstream 110077 102671063 ~ 102671583 (-)
G213635 NA non-coding upstream 110794 102671780 ~ 102672123 (-)
G213636 LOC100380853 non-coding upstream 111571 102672557 ~ 102672850 (-)
G213637 LOC106562530 non-coding upstream 112260 102673246 ~ 102673469 (-)
G214014 NA non-coding upstream 188696 102749682 ~ 102756525 (-)
G212836 NA other downstream 788760 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 795645 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 1328731 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 1794239 100662972 ~ 100716213 (-)
G214030 NA other upstream 258382 102819368 ~ 102819829 (-)
G214038 NA other upstream 283035 102844021 ~ 102847527 (-)
G214041 NA other upstream 302421 102863407 ~ 102863771 (-)
G214126 NA other upstream 560663 103121649 ~ 103122969 (-)
G214137 NA other upstream 595524 103156510 ~ 103157854 (-)

Expression


Co-expression Network