G213634 (LOC106604990)


Basic Information

Item Value
gene id G213634
gene name LOC106604990
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102671063 ~ 102671583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242657
CCGCacgtgtggcagaatagatcaagatgtcatcgatgtacactaccactccctgcccgagcaggtctcggagaatctcatctacgaaggattggaagacggctggagcattcttcaacccatatggcatgacgcggtactcataatgaccagatgtagtactaaatatggttttccactcatcttctccccggatacgcaccagattatacgcgctcctcaggtccagttttgtgaagaagcgcgccccgtgaaatgattccaccgccgtagcgatgagaggtagtgggtaactaaaccccactgtgatggaatttagacctctataatcaatgcacggacgcagacctccatccttcttcttcacaaaaaagaagcttgaggagacgggtgatgcggagggccgaatgtacccctgtcccagcgatTCAGCAACATATGTTTCCATCGctaccgtctcctcctgggacaatggatacacgtgactcctaggaagtgcagcgttctccagaagGTTTATC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU242657 True 521 lncRNA 0.47 1 102671063 102671583

Neighbor

gene id symbol gene type direction distance location
c2h15orf39 LOC106561847 coding downstream 56657 102575299 ~ 102614406 (-)
hexa hexa coding downstream 110077 102508492 ~ 102560986 (-)
LOC110501505 LOC106561846 coding downstream 226804 102426057 ~ 102444259 (-)
commd4 comd4 coding downstream 378707 102287895 ~ 102292356 (-)
LOC110501416 LOC106561859 coding downstream 670976 101997799 ~ 102000087 (-)
trnaq-cug NA coding upstream 63697 102735280 ~ 102735351 (-)
LOC110501471 rl4a coding upstream 99562 102771145 ~ 102777929 (-)
LOC118944154 NA coding upstream 100615 102772198 ~ 102772265 (-)
LOC118944156 NA coding upstream 100968 102772551 ~ 102772618 (-)
LOC118944153 NA coding upstream 103329 102774912 ~ 102774979 (-)
G213573 NA non-coding downstream 136497 102534226 ~ 102534566 (-)
G213475 NA non-coding downstream 139485 102386129 ~ 102531578 (-)
G213569 NA non-coding downstream 150273 102520299 ~ 102520790 (-)
G213536 NA non-coding downstream 172316 102452206 ~ 102498747 (-)
G213533 NA non-coding downstream 205868 102448933 ~ 102465195 (-)
G213635 NA non-coding upstream 197 102671780 ~ 102672123 (-)
G213636 LOC100380853 non-coding upstream 974 102672557 ~ 102672850 (-)
G213637 LOC106562530 non-coding upstream 1663 102673246 ~ 102673469 (-)
G214014 NA non-coding upstream 78099 102749682 ~ 102756525 (-)
G214017 NA non-coding upstream 89293 102760876 ~ 102761080 (-)
LOC110517830 LOC105018063 other downstream 924512 101743015 ~ 101746551 (-)
G212836 NA other downstream 951331 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 958216 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 1491302 100976119 ~ 101191014 (-)
G214030 NA other upstream 147785 102819368 ~ 102819829 (-)
G214038 NA other upstream 172438 102844021 ~ 102847527 (-)
G214041 NA other upstream 191824 102863407 ~ 102863771 (-)
G214126 NA other upstream 450066 103121649 ~ 103122969 (-)
G214137 NA other upstream 484927 103156510 ~ 103157854 (-)

Expression


Co-expression Network