G213569


Basic Information

Item Value
gene id G213569
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 102520299 ~ 102520790 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU242584
GTGGGAcagtgtggagtggagtgggacagtgtggagtggGACAGTGTGGAGTGGGACAGTTTGCAGTGAAGAAAAGTGCTATGTGCAGTTAACTATTAGATGTCTGTGATCATATGTTTTTCATAGTAATAATAATCATTGTCATCCACTCAGACCTAAGGGGTGAAATGAAATAAACATACAAGGATCAGAAAAACAGCATGTCACCGTGTTTTAGCGGCAAGAAGCCATCTGCACAATCAGTTAACTTTGCAGTGAATAGTGTGTCTAGTTGGAATAtgtataggggagagtggggaaaCCTGAGCCttaggggtaagttgagccacccttgtttctaggaaaccatacacaaaattaatTATTTTAGGTAATATTTAAGAATTGGtgatcatttcatggagtctgaaggaagaaaccacatggtaAAAGTGGTAAacaagttaggtccaaaaaa

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU242584 True 457 lncRNA 0.36 2 102520299 102520790

Neighbor

gene id symbol gene type direction distance location
LOC110501505 LOC106561846 coding downstream 76040 102426057 ~ 102444259 (-)
commd4 comd4 coding downstream 227943 102287895 ~ 102292356 (-)
LOC110501416 LOC106561859 coding downstream 520212 101997799 ~ 102000087 (-)
LOC110501407 LOC106561868 coding downstream 603856 101912984 ~ 101916443 (-)
LOC110517830 LOC105018063 coding downstream 773752 101743015 ~ 101746551 (-)
c2h15orf39 LOC106561847 coding upstream 54509 102575299 ~ 102614406 (-)
trnaq-cug NA coding upstream 214490 102735280 ~ 102735351 (-)
LOC110501471 rl4a coding upstream 250355 102771145 ~ 102777929 (-)
LOC118944154 NA coding upstream 251408 102772198 ~ 102772265 (-)
LOC118944156 NA coding upstream 251761 102772551 ~ 102772618 (-)
G213536 NA non-coding downstream 21552 102452206 ~ 102498747 (-)
G213533 NA non-coding downstream 55104 102448933 ~ 102465195 (-)
G213507 NA non-coding downstream 136333 102381645 ~ 102383966 (-)
G213495 NA non-coding downstream 161389 102358191 ~ 102358910 (-)
G213485 NA non-coding downstream 185211 102334777 ~ 102335088 (-)
G213573 NA non-coding upstream 13436 102534226 ~ 102534566 (-)
G213634 LOC106604990 non-coding upstream 150273 102671063 ~ 102671583 (-)
G213635 NA non-coding upstream 150990 102671780 ~ 102672123 (-)
G213636 LOC100380853 non-coding upstream 151767 102672557 ~ 102672850 (-)
G213637 LOC106562530 non-coding upstream 152456 102673246 ~ 102673469 (-)
G212836 NA other downstream 800567 101719367 ~ 101719732 (-)
G212829 LOC106613263 other downstream 807452 101712238 ~ 101712847 (-)
LOC110502631 LOC106592148 other downstream 1340538 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 1806046 100662972 ~ 100716213 (-)
G214030 NA other upstream 298578 102819368 ~ 102819829 (-)
G214038 NA other upstream 323231 102844021 ~ 102847527 (-)
G214041 NA other upstream 342617 102863407 ~ 102863771 (-)
G214126 NA other upstream 600859 103121649 ~ 103122969 (-)
G214137 NA other upstream 635720 103156510 ~ 103157854 (-)

Expression


Co-expression Network