XLOC_021613 (CR388168.1)


Basic Information

Item Value
gene id XLOC_021613
gene name CR388168.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 19217528 ~ 19218940 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042896
TGTTGTGTTGCTGTCAGATGCATGAGAGTACATATTGGGAAGTAGATGTTTGAGATTGTCTAGCATGTACTCTGTGAAGCTGATGCACATCTCCTGCTCCTCAAGCATTGTGGGGCCTTAAGGAACATGAAAGATGATTGGTCCAAAGACTATAGACAGGTTGGTGGTGGTCATGCAGTTGACTCCACTATTAGCAACCACACGGGAAAGGAAGAATGCTAAATAGCAGAGGATGTTAAAATGGTCCTCTGGAAGGCTGTCCAGGATTTTTTTCACCGCCTGGTGAGGTTTGCTCAGTTTAAAGATCCTGAACACCTCCAGCAGCTCAATCATGAGTGGCCCTGAAATGAAACCACCGGGAGGCACTCAGAGGAAATGTTTTAAGACGGAGGCTGAGGAATGAACACCCTCAATCTTCAGCTCTGGAAAGCCACCCTTGATCAAAACATCTCCTCAGCTCATACTGGCACAACAGTATCCCATCAACCCTAAACAGGCCGCTTGTATCGAGGcCATGCTTCTCCAGGAAGCCCAATAAATGTGTGAGGAATAAAGGAAGCCCTGCCTCATCTGACTGTTGTTCCTAAGATAGGACAAAGGCACACCCAACACTTTACTCAGTGTTTCCTCACACACTGATAAAACTCCCATTATGGGGTTTTGCCGAGTTGGCAAACAAATCCGAGGGGTGTCCAAAGCCGTGAGTCAAATCCAGAAAAGAGTCAAAAACAGAGAATCAATAGCCGCAATCAATAGTAAAATCGCAAACCGCA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000092818

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042896 True 773 processed_transcript 0.46 5 19217528 19218940

Neighbor

gene id symbol gene type direction distance location
XLOC_021611 si:dkey-109j17.5 coding upstream 11109 19202636 ~ 19206419 (+)
XLOC_021610 ccdc115 coding upstream 16200 19198244 ~ 19201328 (+)
XLOC_021609 si:dkey-93l1.4 coding upstream 29712 19182819 ~ 19187816 (+)
XLOC_021608 CR388168.2 coding upstream 35140 19177891 ~ 19182388 (+)
XLOC_021607 NA coding upstream 98085 19105546 ~ 19119443 (+)
XLOC_021614 NA coding downstream 254456 19473396 ~ 19476151 (+)
XLOC_021615 atp6ap1lb coding downstream 339634 19558574 ~ 19583814 (+)
XLOC_021616 slmapb coding downstream 371066 19590006 ~ 19604413 (+)
XLOC_021617 flnb coding downstream 387351 19606291 ~ 19652915 (+)
XLOC_021618 abhd6b coding downstream 436361 19655301 ~ 19667758 (+)
XLOC_021606 CR788311.1 non-coding upstream 150541 19051485 ~ 19066987 (+)
XLOC_021604 NA non-coding upstream 288526 18924470 ~ 18929002 (+)
XLOC_021602 CR847953.2 non-coding upstream 486129 18731322 ~ 18731399 (+)
XLOC_021627 AL953864.1 non-coding downstream 968685 20187625 ~ 20187739 (+)
XLOC_021628 NA non-coding downstream 1126370 20345310 ~ 20361426 (+)
XLOC_021632 CR352228.2 non-coding downstream 1252815 20471755 ~ 20471870 (+)
XLOC_021651 NA non-coding downstream 2254162 21473102 ~ 21474482 (+)

Expression


Co-expression Network