G222023 (LOC100136250)


Basic Information

Item Value
gene id G222023
gene name LOC100136250
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 8853817 ~ 8949187 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU253485
CTGCCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTAAGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAACAGGATGGAAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACTGGCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTATAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCAGCCCAACAATGCACAAAGAGGTCACCTCACCCTCCTTGACGAAGGTGCCCTGATGCTCTACAGTCACAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACTGTATTCAAAAGCCTAAAGGCTTTTTAACTCTTTGATTTGGTCAAATAAAACTGTATTGACTTAAAG
>TU253488
TTGTACCAATTAGTATTCGAGACCCCTGTGAGAACCATGGGATTTGGTGGCGGAATGTTCGCTGCCATAGCGATGGAATAGGAGATATCTTTGCCTTCAGCCATCGGGGTAACATTAGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCAACCTGCAATTCACCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTATGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACTGGCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTATAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCAGCCCAACAATGCACAAAGAGGTCACCTCACCCTCCTTGACGAAGGTGCCCTGATGCTCTACAGTCACAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACTGTATTCAAAAGCCTAAAGGCTTTTTAACTCTTTGATTTGGTCAAATAAAACTGTATTGACTTAAAG
>TU253492
TTGTACCAATTAGTATTCGAGACCCCTGTGAGAACCATGGGATTTGGTGGCGGAATGTTCGCTGCCATAGCGATGGAATAGGAGATATCTTTGCCTTCAGCCATCGGGGTAACATTAGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCAACCTGCAATTCACCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTAAGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTATGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGAAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACCGCCCGTTGCAACAATACACAGAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTATAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCAGCCCAACAATGCACAAAGAGGTCACCTCACCCTCCTTGACGAAGGTGCCCTGATGCTCTACAGTCACAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACTGTATTCAAAAGCCTAAAGGCTTTTTAACTCTTTGATTTGGTCAAATAAAACTGTATTGACTTAAAG
>TU253493
TTACTAATgtaggcagggcagggcagtgcTCTTTGCCTCGTGCGTGTGTATTTTCACAGTATTTacaccaaatcaaatgtattcatatagcccttcttacatcagctgatatatcaaagtgctgtacagaaacccagcctaaaaccctaaagagcaagcaatgcGTCTCTCTCTTAGTAGACGCCGGCGCGTATCCTCATTTGCAATTCCCAGCACTATTTTGTTACGAATCAATTCATCTTTCAATCCCCAGTATTCACAAGTAGCGGATCTTTCTCTCAAACGTGTTACAAAGATGTGTACTGACTCACCCTGTTTGCAGCTTTCGAAAACGAACCAATCGTAAATGACGTTCCTGGTGGGTTTGAAGTAATTCTCCAATGCAATCCAATATAGCCTTTGCATCACACTGTTGTCGTGCTGTGAGGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCAACCTGCAATTCACCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTATGAACTACATGAGCACTGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACCGCCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTATAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCAGCCCAACAATGCACAAAGAGGTCACCTCACCCTCCTTGACGAAGGTGCCCTGATGCTCTACAGTCACAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACTGTATTCAAAAGCCTAAAGGCTTTTTAACTCTTTGATTTGGTCAAATAAAACTGTATTGACTTAAAG
>TU253487
CTGCCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTAAGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACCGCCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTACAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCGGCCCAACAATGCACAGAGGTCACCTCACCCTCACTGACGAAGGTGCCCTGATGCTCTACAGTCCCAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACT
>TU253490
GTATCCTCATTTGCAATTCCCAGCACTATTTTGTCACGAATCAATTCATCTTTCAATCCCCAGGATTCACAAGTAGCGGATCTTTCTCTCAAACGTGTTACAAAGATGTGTACTGACACACTGTTTGCAGCTTCCGAAAACGAACCAATCGTAAATGACGTTCCTGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTATGAACTACATGAGCACTGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACCGCCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTACAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCGGCCCAACAATGCACAGAGGTCACCTCACCCTCACTGACGAAGGTGCCCTGATGCTCTACAGTCCCAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACT
>TU253494
TATTAAGGTTTCTTTCCTTTTACTTAAatgacatttgggtactttttcccaCCACTGGTCATTGTATCTATCATGTACATTTCTGCCGCATTTGGTCAAATTTAATGTACAGTGGACACCACCCATTTCCTCATCCTTATTACTCCACCCCCTTCACCTGAGCAGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTATGAACTACATGAGCACTGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACCGCCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTACAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCGGCCCAACAATGCACAGAGGTCACCTCACCCTCACTGACGAAGGTGCCCTGATGCTCTACAGTCCCAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACT
>TU253489
TTACTAATgtaggcagggcagggcagtgcTCTTTGCCTCGTGCGTGTGTATTTTCACAGTATTTacaccaaatcaaatgtattcatatagcccttcttacatcagctgatatatcaaagtgctgtacagaaacccagcctaaaaccctaaagagcaagcaatgcGTCTCTCTCTTAGTAGACGCCGGCGCGTATCCTCATTTGCAATTCCCAGCACTATTTTGTTACGAATCAATTCATCTTTCAATCCCCAGTATTCACAAGTAGCGGATCTTTCTCTCAAACGTGTTACAAAGATGTGTACTGACTCACCCTGTTTGCAGCTTTCGAAAACGAACCAATCGTAAATGACGTTCCTGGTGGGTTTGAAGTAATTCTCCAATGCAATCCAATATAGCCTTTGCATCACACTGTTGTCGTGCTGTGAGGGGATATAAGGCCAGAGCTGCTTCATCACCGCACAACTGCAACCTGCAATTCACCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTATGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAAAAGGATGGCAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGTCAAGTAACACTGGCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTACAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCGGCCCAACAATGCACAGAGGTCACCTCACCCTCACTGACGAAGGTGCCCTGATGCTCTACAGTCCCAGAAATGTGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGACCATACCTGTCTACATCTACCACTAAACTGTATTCAAAAGCCTTGAGGCTTTAACCCTTTGATTTGGTCAAATAAAACTGTATTGACTTAAAGTAG
>TU253486
CTGCCTCTTCAATCTACTGCTCCTAAATACTTGGAAGTTCATTTAAGAATTTGAGAATCATGAGTAAGAACTACATGAGCACCGAGAGGATTCTGCTGAAAGAGGACTACCTCCTCTCCAACAATGGACAATTTAAAGCTATCTTTCAGACCGATGGCAACTTTGTGCTCTACGGTTGGGGTCGGGTTGTCTGGGCATCAAACACTGTGAACAAAGATGCTCAGAGGCTCATCCTCCAACAGGATGGAAACCTGGTCATCTACACCAAACAGGACCATCCCATTTGGGCAAGTAACACTGGCCGTTGCAACAATACACAAAGAGGCCACCTCACCCTCACTGACAAAGGTACCCTGGAGCTCTATAGAGACCGAGAGGTGATCTGGACATCGTAACATCGACCAGCCCAACAATGCACAAAGAGGTCACCTCACCCTCCCTGACGAAGGTGCCCTGATGCTCTACAGTCCCAGAAATATGGTCTGGTGCTCTCGTGAGGACACTAGTAATGAGGCAGAGTAACAGCTTCACTTGATCATACCTGTCTACATCTACC

Function

NR:

description
lectin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253485 False 630 TUCP 0.46 5 8853817 8949187
TU253488 False 797 TUCP 0.46 5 8853817 8921034
TU253492 False 797 TUCP 0.46 4 8853817 8921034
TU253493 False 1107 TUCP 0.45 5 8853817 8921589
TU253487 False 562 TUCP 0.48 3 8879071 8949187
TU253490 False 763 TUCP 0.50 4 8879071 8888919
TU253494 False 762 TUCP 0.47 3 8879071 8887818
TU253489 False 1106 TUCP 0.45 4 8912435 8921589
TU253486 True 556 TUCP 0.48 3 8938896 8949187

Neighbor

gene id symbol gene type direction distance location
LOC110520835 ash1l coding downstream 14138 8804651 ~ 8839679 (-)
LOC110520892 LOC106605923 coding downstream 150554 8699031 ~ 8703263 (-)
LOC118964372 NA coding downstream 151800 8701883 ~ 8702017 (-)
LOC118964373 NA coding downstream 152219 8701463 ~ 8701598 (-)
LOC110520844 LOC106605887 coding downstream 358427 8466936 ~ 8495390 (-)
LOC110520856 LOC106591015 coding upstream 24769 8973956 ~ 8982283 (-)
LOC110520814 LOC106595728 coding upstream 38897 8988084 ~ 9050862 (-)
LOC110501040 LOC106605812 coding upstream 152238 9101425 ~ 9118437 (-)
LOC110500119 LOC105018975 coding upstream 173035 9122222 ~ 9150991 (-)
LOC110508553 LOC105018974 coding upstream 211796 9160983 ~ 9231958 (-)
G222009 NA non-coding downstream 50151 8803105 ~ 8803666 (-)
G222007 NA non-coding downstream 50798 8801951 ~ 8803019 (-)
G221988 NA non-coding downstream 81884 8770564 ~ 8771933 (-)
G221987 NA non-coding downstream 86341 8763986 ~ 8767476 (-)
G221975 NA non-coding downstream 130999 8718840 ~ 8722818 (-)
G222059 NA non-coding upstream 4237 8953424 ~ 8953678 (-)
G222064 NA non-coding upstream 14565 8963752 ~ 8963983 (-)
G222066 NA non-coding upstream 22289 8971476 ~ 8972335 (-)
G222412 NA non-coding upstream 36457 8985644 ~ 8987837 (-)
G221986 NA other downstream 89933 8763119 ~ 8763884 (-)
G221807 adar other downstream 330609 8503184 ~ 8523208 (-)
G221806 NA other downstream 443008 8394361 ~ 8410809 (-)
G221788 LOC106574877 other downstream 503528 8345683 ~ 8350289 (-)
G222465 NA other upstream 143993 9093180 ~ 9095216 (-)
G222607 LOC106574954 other upstream 545609 9494796 ~ 9496853 (-)
LOC110508584 LOC104949237 other upstream 581987 9528874 ~ 9551643 (-)
LOC110520821 LOC106574299 other upstream 612558 9559133 ~ 9594654 (-)

Expression


Co-expression Network