G228938



Basic Information


Item Value
gene id G228938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 16055398 ~ 16056008 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU261908
tgtaaacactgttgttctaaatctaaagctctttggtctttcataggcttatatctacatttcattacaatgttctacagtgaaagtaatctgctgagaggggtaacaagtacactgtaaacaccaatgcaatgtagaaacagaaaatatttattgggccaaacattactgttgtattcagtagcatacaacaaaaccataaacatatgtaaaccaaagtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtacttttttgtgaagaatcaacaacaagtgggacacaatcatgaagcggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaagaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcat

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU261908 True 611 lncRNA 0.41 1 16055398 16056008

Neighbor


gene id symbol gene type direction distance location
LOC118946082 NA coding downstream 89953 15965041 ~ 15965445 (-)
LOC118944492 NA coding downstream 119954 15932818 ~ 15935521 (-)
LOC110503781 LOC106605653 coding downstream 142669 15900898 ~ 15912729 (-)
LOC110512120 LOC106605647 coding downstream 193829 15853231 ~ 15861569 (-)
LOC110503786 telt coding downstream 225372 15824078 ~ 15830026 (-)
LOC110512031 grik2 coding upstream 131373 16187381 ~ 16421977 (-)
cep162 cep162 coding upstream 748994 16805002 ~ 16826110 (-)
LOC110503762 LOC106605503 coding upstream 1019505 17075513 ~ 17188347 (-)
LOC118946294 NA coding upstream 1046457 17102465 ~ 17105382 (-)
LOC110511923 LOC106579390 coding upstream 1884510 17940518 ~ 17947436 (-)
G228933 NA non-coding downstream 11331 16041282 ~ 16044067 (-)
G228889 NA non-coding downstream 82131 15971558 ~ 15973267 (-)
G228823 NA non-coding downstream 196606 15858361 ~ 15858792 (-)
G228822 NA non-coding downstream 202197 15852446 ~ 15853201 (-)
G228994 NA non-coding upstream 95768 16151776 ~ 16152337 (-)
G229005 NA non-coding upstream 111994 16168002 ~ 16168219 (-)
G229007 NA non-coding upstream 119213 16175221 ~ 16175888 (-)
G229009 NA non-coding upstream 121162 16177170 ~ 16177426 (-)
G229016 NA non-coding upstream 129402 16185410 ~ 16185941 (-)
G228191 LOC106578455 other downstream 264233 15762029 ~ 15791401 (-)
G228098 fbrl other downstream 347133 15706234 ~ 15708265 (-)
G228094 NA other downstream 453910 15601015 ~ 15601488 (-)
LOC110512327 LOC106578554 other downstream 517083 15536363 ~ 15539677 (-)
LOC110503689 tm149 other downstream 1418688 14598789 ~ 14638314 (-)
G229373 LOC100194703 other upstream 783381 16839389 ~ 16839839 (-)
G229380 LOC106605502 other upstream 793964 16849972 ~ 16850199 (-)
G229707 NA other upstream 989017 17043792 ~ 17048344 (-)
LOC110505118 LOC106579600 other upstream 1919237 17975160 ~ 17985544 (-)
LOC110503747 lars2 other upstream 2037748 18093704 ~ 18154474 (-)

Expression



Co-expression Network